RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 ACTR3BQ9P1U1 418 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 ZNF337Q9Y3M9 751 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 SNX13Q9Y5W8 968 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 BCKDKO14874 412 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 FMO6PO60774 539 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 GMNNO75496 209 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 PDE5AO76074 875 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 UQCRBP14927 111 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 TCEA1P23193 301 aaKnown RBP11.6□□□□□ -0.55
TCOF1-210ENST00000506767 HTR2AP28223 471 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 ELK4P28324 431 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 PTGS2P35354 604 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 SLC1A3P43003 542 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 LHX2P50458 406 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 RGS8P57771 180 aaPredicted RBP11.6□□□□□ -0.55
TCOF1-210ENST00000506767 HOXC5Q00444 222 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 NPTX1Q15818 432 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 BCL2A1Q16548 175 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 DCST1Q5T197 706 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 RAET1LQ5VY80 246 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 WBP2NLQ6ICG8 309 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 PLEKHM3Q6ZWE6 761 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 ASRGL1Q7L266 308 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 GRINAQ7Z429 371 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 EID3Q8N140 333 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 OR6T1Q8NGN1 323 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 ZNF563Q8TA94 476 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 FAM57AQ8TBR7 257 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 LZICQ8WZA0 190 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 PROX1Q92786 737 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 ASB9Q96DX5 294 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 WDYHV1Q96HA8 205 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 PRDM14Q9GZV8 571 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 ADPRHL2Q9NX46 363 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 TNFRSF10DQ9UBN6 386 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 TESQ9UGI8 421 aaKnown RBP11.6□□□□□ -0.55
TCOF1-210ENST00000506767 SLC13A4Q9UKG4 626 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 SH3GLB1Q9Y371 365 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 AP4B1Q9Y6B7 739 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 ZNF407Q9C0G0 2248 aa11.6□□□□□ -0.55
TCOF1-210ENST00000506767 NPIPA2E9PIF3 369 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 NPIPA3F8WFD2 350 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 M0R3H8 397 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 ACOT8O14734 319 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 PEPDP12955 493 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 GP1BBP13224 206 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 CPN1P15169 458 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 ZNF708P17019 499 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 IL11P20809 199 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 GCKP35557 465 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 APOBEC1P41238 236 aaKnown RBP11.59□□□□□ -0.55
TCOF1-210ENST00000506767 HTR3AP46098 478 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 STARP49675 285 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 CLDN15P56746 228 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 CLDN18P56856 261 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 COPZ1P61923 177 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 RAC1P63000 192 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 KCNC4Q03721 635 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 RBPJQ06330 500 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 TRAP1Q12931 704 aaKnown RBP11.59□□□□□ -0.55
TCOF1-210ENST00000506767 MRPL49Q13405 166 aaKnown RBP11.59□□□□□ -0.55
TCOF1-210ENST00000506767 GXYLT1Q4G148 440 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 EMC4Q5J8M3 183 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 LCN8Q6JVE9 175 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 ENPP6Q6UWR7 440 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 VTCN1Q7Z7D3 282 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 ADGRG3Q86Y34 549 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 RBM45Q8IUH3 476 aaKnown RBP11.59□□□□□ -0.55
TCOF1-210ENST00000506767 OR10Q1Q8NGQ4 319 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 PHF10Q8WUB8 498 aaKnown RBP11.59□□□□□ -0.55
TCOF1-210ENST00000506767 TPD52L3Q96J77 140 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 NSMCE2Q96MF7 247 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 ZNF559Q9BR84 538 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 PRR14Q9BWN1 585 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 TRIM2Q9C040 744 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 MMADHCQ9H3L0 296 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-210ENST00000506767 CTPS2Q9NRF8 586 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 RPS6KA6Q9UK32 745 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 SAMD4AQ9UPU9 718 aaKnown RBP11.59□□□□□ -0.55
TCOF1-210ENST00000506767 SLC9A8Q9Y2E8 581 aa11.59□□□□□ -0.55
TCOF1-210ENST00000506767 SPTA1P02549 2419 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 H3BML4 177 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 SLC19A2O60779 497 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 SEMA7AO75326 666 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 ZNF682O95780 498 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 ABOP16442 354 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 TNFRSF1BP20333 461 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 ATP6V1B2P21281 511 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 TACR3P29371 465 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 OR1E2P47887 323 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 POLR2HP52434 150 aaKnown RBP11.58□□□□□ -0.56
TCOF1-210ENST00000506767 MERTKQ12866 999 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 SELENBP1Q13228 472 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 OR1Q1Q15612 314 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.58□□□□□ -0.56
TCOF1-210ENST00000506767 MTX3Q5HYI7 312 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 WLSQ5T9L3 541 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 YTHDF3Q7Z739 585 aaKnown RBP11.58□□□□□ -0.56
TCOF1-210ENST00000506767 GGNQ86UU5 652 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 RANBP3LQ86VV4 465 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms