RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 TTMPQ5BVD1 217 aa14.9□□□□□ -0.02
PDLIM7-215ENST00000506161 AP1ARQ63HQ0 302 aa14.9□□□□□ -0.02
PDLIM7-215ENST00000506161 BHLHB9Q6PI77 547 aa14.9□□□□□ -0.02
PDLIM7-215ENST00000506161 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.9□□□□□ -0.02
PDLIM7-215ENST00000506161 CROCCP2Q86T23 111 aa14.9□□□□□ -0.02
PDLIM7-215ENST00000506161 CXorf67Q86X51 503 aaPredicted RBP14.9□□□□□ -0.02
PDLIM7-215ENST00000506161 ZNF619Q8N2I2 560 aa14.9□□□□□ -0.02
PDLIM7-215ENST00000506161 ZFP90Q8TF47 636 aa14.9□□□□□ -0.02
PDLIM7-215ENST00000506161 CNOT9Q92600 299 aaKnown RBP14.9□□□□□ -0.02
PDLIM7-215ENST00000506161 ZNF75CPQ92670 426 aaPredicted RBP14.9□□□□□ -0.02
PDLIM7-215ENST00000506161 PIK3IP1Q96FE7 263 aa14.9□□□□□ -0.02
PDLIM7-215ENST00000506161 MRGPRX4Q96LA9 322 aa14.9□□□□□ -0.02
PDLIM7-215ENST00000506161 OR52E6Q96RD3 313 aa14.9□□□□□ -0.02
PDLIM7-215ENST00000506161 DLL4Q9NR61 685 aa14.9□□□□□ -0.02
PDLIM7-215ENST00000506161 ELOVL5Q9NYP7 299 aa14.9□□□□□ -0.02
PDLIM7-215ENST00000506161 PCDHGB4Q9UN71 923 aa14.9□□□□□ -0.02
PDLIM7-215ENST00000506161 DUXAA6NLW8 204 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 C16orf97H3BN30 126 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 H3BNH8 94 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 SMAD9O15198 467 aaKnown RBP14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 KLF4O43474 513 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 GCM2O75603 506 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 AK1P00568 194 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 PLAUP00749 431 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 ME2P23368 584 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 DNASE1P24855 282 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 CHI3L1P36222 383 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 KCNJ5P48544 419 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 KHKP50053 298 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 ADAM8P78325 824 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 SELENBP1Q13228 472 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 DPY19L1Q2PZI1 675 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 DEFB113Q30KQ7 82 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 NXNQ6DKJ4 435 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 TFAP2EQ6VUC0 442 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 PLEKHM3Q6ZWE6 761 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 ATG4DQ86TL0 474 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 WFDC11Q8NEX6 87 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 TOR1AIP2Q8NFQ8 470 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 NANOS1Q8WY41 292 aaKnown RBP14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 VPS33AQ96AX1 596 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 ZNF775Q96BV0 537 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 AURKBQ96GD4 344 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 PANX1Q96RD7 426 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 ZNF300Q96RE9 604 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 MED18Q9BUE0 208 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 RSPO3Q9BXY4 272 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 SLCO1B3Q9NPD5 702 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 CTPS2Q9NRF8 586 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 EXD2Q9NVH0 621 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 NDRG3Q9UGV2 375 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 EMC9Q9Y3B6 208 aa14.89□□□□□ -0.03
PDLIM7-215ENST00000506161 ZNF814B7Z6K7 855 aa14.88□□□□□ -0.03
PDLIM7-215ENST00000506161 RAMP1O60894 148 aa14.88□□□□□ -0.03
PDLIM7-215ENST00000506161 PLGP00747 810 aaPredicted RBP14.88□□□□□ -0.03
PDLIM7-215ENST00000506161 RYKP34925 604 aa14.88□□□□□ -0.03
PDLIM7-215ENST00000506161 CTBP2P56545 445 aa14.88□□□□□ -0.03
PDLIM7-215ENST00000506161 LTBQ06643 244 aa14.88□□□□□ -0.03
PDLIM7-215ENST00000506161 CBFBQ13951 182 aa14.88□□□□□ -0.03
PDLIM7-215ENST00000506161 PDCD4Q53EL6 469 aaKnown RBP14.88□□□□□ -0.03
PDLIM7-215ENST00000506161 GPAT3Q53EU6 434 aa14.88□□□□□ -0.03
PDLIM7-215ENST00000506161 ZNF621Q6ZSS3 439 aa14.88□□□□□ -0.03
PDLIM7-215ENST00000506161 FCRLAQ7L513 359 aa14.88□□□□□ -0.03
PDLIM7-215ENST00000506161 MBD6Q96DN6 1003 aa14.88□□□□□ -0.03
PDLIM7-215ENST00000506161 ARL5BQ96KC2 179 aa14.88□□□□□ -0.03
PDLIM7-215ENST00000506161 OR5B2Q96R09 309 aa14.88□□□□□ -0.03
PDLIM7-215ENST00000506161 PSD2Q9BQI7 771 aa14.88□□□□□ -0.03
PDLIM7-215ENST00000506161 EBF4Q9BQW3 602 aa14.88□□□□□ -0.03
PDLIM7-215ENST00000506161 CCDC106Q9BWC9 280 aa14.88□□□□□ -0.03
PDLIM7-215ENST00000506161 REPIN1Q9BWE0 567 aaKnown RBP14.88□□□□□ -0.03
PDLIM7-215ENST00000506161 PAQR5Q9NXK6 330 aaPredicted RBP14.88□□□□□ -0.03
PDLIM7-215ENST00000506161 PRSS50Q9UI38 385 aa14.88□□□□□ -0.03
PDLIM7-215ENST00000506161 ACANP16112 2415 aa14.88□□□□□ -0.03
PDLIM7-215ENST00000506161 SOX30O94993 753 aa14.87□□□□□ -0.03
PDLIM7-215ENST00000506161 GUSBP08236 651 aa14.87□□□□□ -0.03
PDLIM7-215ENST00000506161 HOXB9P17482 250 aaPredicted RBP14.87□□□□□ -0.03
PDLIM7-215ENST00000506161 RPS4Y1P22090 263 aaKnown RBP14.87□□□□□ -0.03
PDLIM7-215ENST00000506161 NTF4P34130 210 aa14.87□□□□□ -0.03
PDLIM7-215ENST00000506161 AGBL2Q5U5Z8 902 aa14.87□□□□□ -0.03
PDLIM7-215ENST00000506161 ATG16L1Q676U5 607 aa14.87□□□□□ -0.03
PDLIM7-215ENST00000506161 SEZ6L2Q6UXD5 910 aa14.87□□□□□ -0.03
PDLIM7-215ENST00000506161 GABRG1Q8N1C3 465 aa14.87□□□□□ -0.03
PDLIM7-215ENST00000506161 RAB3IL1Q8TBN0 382 aa14.87□□□□□ -0.03
PDLIM7-215ENST00000506161 PIWIL2Q8TC59 973 aaKnown RBP14.87□□□□□ -0.03
PDLIM7-215ENST00000506161 CPNE4Q96A23 557 aaPredicted RBP14.87□□□□□ -0.03
PDLIM7-215ENST00000506161 ALPK1Q96QP1 1244 aa14.87□□□□□ -0.03
PDLIM7-215ENST00000506161 SLC39A3Q9BRY0 314 aa14.87□□□□□ -0.03
PDLIM7-215ENST00000506161 OR11A1Q9GZK7 315 aa14.87□□□□□ -0.03
PDLIM7-215ENST00000506161 HHATLQ9HCP6 504 aa14.87□□□□□ -0.03
PDLIM7-215ENST00000506161 ACER3Q9NUN7 267 aa14.87□□□□□ -0.03
PDLIM7-215ENST00000506161 NKIRAS1Q9NYS0 192 aa14.87□□□□□ -0.03
PDLIM7-215ENST00000506161 KLHL13Q9P2N7 655 aa14.87□□□□□ -0.03
PDLIM7-215ENST00000506161 STOML1Q9UBI4 398 aa14.87□□□□□ -0.03
PDLIM7-215ENST00000506161 CHST2Q9Y4C5 530 aa14.87□□□□□ -0.03
PDLIM7-215ENST00000506161 ROS1P08922 2347 aa14.87□□□□□ -0.03
PDLIM7-215ENST00000506161 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-215ENST00000506161 TRPC5OSA6NMA1 111 aa14.86□□□□□ -0.03
PDLIM7-215ENST00000506161 KLF11O14901 512 aa14.86□□□□□ -0.03
PDLIM7-215ENST00000506161 CASKO14936 926 aa14.86□□□□□ -0.03
PDLIM7-215ENST00000506161 ERLIN1O75477 346 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms