RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 SLC35E1Q96K37 410 aa2.45□□□□□ -2.02
CHD1-203ENST00000505657 ARHGDIGQ99819 225 aa2.45□□□□□ -2.02
CHD1-203ENST00000505657 KLHDC3Q9BQ90 382 aa2.45□□□□□ -2.02
CHD1-203ENST00000505657 SRXN1Q9BYN0 137 aa2.45□□□□□ -2.02
CHD1-203ENST00000505657 CRNKL1Q9BZJ0 848 aaKnown RBP2.45□□□□□ -2.02
CHD1-203ENST00000505657 PLLPQ9Y342 182 aa2.45□□□□□ -2.02
CHD1-203ENST00000505657 SPACA6W5XKT8 324 aa2.45□□□□□ -2.02
CHD1-203ENST00000505657 A0A0G2JRQ6 117 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 VSTM2BA6NLU5 285 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 KIF2AO00139 706 aaPredicted RBP2.44□□□□□ -2.02
CHD1-203ENST00000505657 SULT2B1O00204 365 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 CPLX1O14810 134 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 CTAGE5O15320 804 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 CA1P00915 261 aaPredicted RBP2.44□□□□□ -2.02
CHD1-203ENST00000505657 HSPA5P11021 654 aaKnown RBP2.44□□□□□ -2.02
CHD1-203ENST00000505657 TPSB2P20231 275 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 HTR1EP28566 365 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 CD80P33681 288 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 NUP107P57740 925 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 ELP6Q0PNE2 266 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 TPSAB1Q15661 275 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 SLC25A24Q6NUK1 477 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 APTXQ7Z2E3 356 aaKnown RBP2.44□□□□□ -2.02
CHD1-203ENST00000505657 ZNF573Q86YE8 665 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 SUMF2Q8NBJ7 301 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 ZNF540Q8NDQ6 660 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 ZNF740Q8NDX6 193 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 IPMKQ8NFU5 416 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 NEIL3Q8TAT5 605 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 SLC5A11Q8WWX8 675 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 OR1E3Q8WZA6 343 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 MYDGFQ969H8 173 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 EBF4Q9BQW3 602 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 FICDQ9BVA6 458 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 MAGT1Q9H0U3 335 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 NARFLQ9H6Q4 476 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 MEAF6Q9HAF1 191 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 CDH10Q9Y6N8 788 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 PLEKHG1Q9ULL1 1385 aa2.44□□□□□ -2.02
CHD1-203ENST00000505657 TMEM110-MUSTN1A8MSY1 372 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 CLDN3O15551 220 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 HCN1O60741 890 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 NEBLO76041 1014 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 SLITRK3O94933 977 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 PCCBP05166 539 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 CALCBP10092 127 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 EPB41P11171 864 aaKnown RBP2.43□□□□□ -2.02
CHD1-203ENST00000505657 NMT1P30419 496 aaKnown RBP2.43□□□□□ -2.02
CHD1-203ENST00000505657 ACAA2P42765 397 aaKnown RBP2.43□□□□□ -2.02
CHD1-203ENST00000505657 TIMM10P62072 90 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 RIPPLY1Q0D2K3 151 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 ANKDD1AQ495B1 522 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 LRRC8BQ6P9F7 803 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 WDR74Q6RFH5 385 aaPredicted RBP2.43□□□□□ -2.02
CHD1-203ENST00000505657 TMEM110Q86TL2 294 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 GRAMD2AQ8IUY3 354 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 C15orf54Q8N8G6 183 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 Q8N9L7 120 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 SRSF12Q8WXF0 261 aaKnown RBP2.43□□□□□ -2.02
CHD1-203ENST00000505657 THRSPQ92748 146 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 RAB7BQ96AH8 199 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 MBOAT4Q96T53 435 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 SLC6A7Q99884 636 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 TPPP3Q9BW30 176 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 ZNF416Q9BWM5 594 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 LCE3DQ9BYE3 92 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 ZDHHC11Q9H8X9 412 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 SH2D2AQ9NP31 389 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 MYOZ2Q9NPC6 264 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 AATFQ9NY61 560 aaKnown RBP eCLIP2.43□□□□□ -2.02
CHD1-203ENST00000505657 CHRNA9Q9UGM1 479 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 WARS2Q9UGM6 360 aaKnown RBP2.43□□□□□ -2.02
CHD1-203ENST00000505657 DCDC2Q9UHG0 476 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 CHMP2BQ9UQN3 213 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 MFHAS1Q9Y4C4 1052 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 UGT2A1Q9Y4X1 527 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 U3KQV3 271 aa2.43□□□□□ -2.02
CHD1-203ENST00000505657 TTC21BQ7Z4L5 1316 aa2.42□□□□□ -2.02
CHD1-203ENST00000505657 COL4A4P53420 1690 aaPredicted RBP2.42□□□□□ -2.02
CHD1-203ENST00000505657 CARMIL1Q5VZK9 1371 aa2.42□□□□□ -2.02
CHD1-203ENST00000505657 PPIAL4CA0A0B4J2A2 164 aa2.42□□□□□ -2.02
CHD1-203ENST00000505657 ZNF780AO75290 641 aaPredicted RBP2.42□□□□□ -2.02
CHD1-203ENST00000505657 CA11O75493 328 aa2.42□□□□□ -2.02
CHD1-203ENST00000505657 BBOX1O75936 387 aa2.42□□□□□ -2.02
CHD1-203ENST00000505657 ZNF853P0CG23 659 aa2.42□□□□□ -2.02
CHD1-203ENST00000505657 PPIAL4GP0DN37 164 aa2.42□□□□□ -2.02
CHD1-203ENST00000505657 CYP2B6P20813 491 aa2.42□□□□□ -2.02
CHD1-203ENST00000505657 HOXD10P28358 340 aa2.42□□□□□ -2.02
CHD1-203ENST00000505657 RPS10P46783 165 aaKnown RBP2.42□□□□□ -2.02
CHD1-203ENST00000505657 IFNAR2P48551 515 aa2.42□□□□□ -2.02
CHD1-203ENST00000505657 UNC119Q13432 240 aa2.42□□□□□ -2.02
CHD1-203ENST00000505657 TAF7Q15545 349 aaPredicted RBP2.42□□□□□ -2.02
CHD1-203ENST00000505657 KIAA1328Q86T90 577 aa2.42□□□□□ -2.02
CHD1-203ENST00000505657 NRMQ8IXM6 262 aa2.42□□□□□ -2.02
CHD1-203ENST00000505657 DENND6BQ8NEG7 585 aa2.42□□□□□ -2.02
CHD1-203ENST00000505657 AENQ8WTP8 325 aaKnown RBP2.42□□□□□ -2.02
CHD1-203ENST00000505657 CHCHD10Q8WYQ3 142 aaPredicted RBP2.42□□□□□ -2.02
CHD1-203ENST00000505657 C4orf36Q96KX1 117 aa2.42□□□□□ -2.02
CHD1-203ENST00000505657 NRTNQ99748 197 aa2.42□□□□□ -2.02
CHD1-203ENST00000505657 SLC25A39Q9BZJ4 359 aaPredicted RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms