RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 PDSS1Q5T2R2 415 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 KDM4DQ6B0I6 523 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 KIAA0907Q7Z7F0 614 aaPredicted RBP13.07□□□□□ -0.32
TCOF1-207ENST00000504761 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.07□□□□□ -0.32
TCOF1-207ENST00000504761 SFXN2Q96NB2 322 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 KATNB1Q9BVA0 655 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 FAM60AQ9NP50 221 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 ERVK13-1Q9NX77 482 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 SLC6A14Q9UN76 642 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 CEPT1Q9Y6K0 416 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 A0A0G2JMZ2 1700 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 A0A0A6YYD5 115 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 ITIH1P19827 911 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 TCN2P20062 427 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 ADH7P40394 386 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 CXCR4P61073 352 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 TSPAN5P62079 268 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 HLA-BQ31612 363 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 DNAJC22Q8N4W6 341 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 IFI44Q8TCB0 444 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 SPRYD4Q8WW59 207 aaPredicted RBP13.07□□□□□ -0.32
TCOF1-207ENST00000504761 DMRTB1Q96MA1 342 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 DIABLOQ9NR28 239 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 OR2A25A4D2G3 310 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 LGI1O95970 557 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 CAPNS1P04632 268 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 FBXO45P0C2W1 286 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 BCKDHBP21953 392 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 TPTEP56180 551 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 C3orf38Q5JPI3 329 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 DCAF12Q5T6F0 453 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 PGBD2Q6P3X8 592 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 SLC46A1Q96NT5 459 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 PITX2Q99697 317 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 BEX2Q9BXY8 128 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 BEX1Q9HBH7 125 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 DUSP22Q9NRW4 184 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 EXTL2Q9UBQ6 330 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 STUB1Q9UNE7 303 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 RBMX2Q9Y388 322 aaKnown RBP13.06□□□□□ -0.32
TCOF1-207ENST00000504761 IGHV5-51A0A0C4DH38 117 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 A0A1B0GVI7 797 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 SULT2B1O00204 365 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 HCKP08631 526 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 TEAD1P28347 426 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 FAUP35544 74 aaKnown RBP13.06□□□□□ -0.32
TCOF1-207ENST00000504761 ADAM8P78325 824 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 C16orf52Q8NHV5 167 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 RBM24Q9BX46 236 aaKnown RBP13.06□□□□□ -0.32
TCOF1-207ENST00000504761 ARRDC1-AS1Q9H2J1 176 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 SLAMF7Q9NQ25 335 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 TMEM14AQ9Y6G1 99 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 MIA3Q5JRA6 1907 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 SYT5O00445 386 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 ITGA5P08648 1049 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 ADARB1P78563 741 aaKnown RBP13.06□□□□□ -0.32
TCOF1-207ENST00000504761 RASGEF1BQ0VAM2 473 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 ARFRP1Q13795 201 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 VN1R4Q7Z5H5 301 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 TMPRSS12Q86WS5 348 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 SGCDQ92629 289 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 FKBP10Q96AY3 582 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 THSD1Q9NS62 852 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 ING3Q9NXR8 418 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 PADI1Q9ULC6 663 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 BAIAP2Q9UQB8 552 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 CMAHPQ9Y471 501 aa13.06□□□□□ -0.32
TCOF1-207ENST00000504761 OR2T1O43869 369 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 SLC16A7O60669 478 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 MAS1P04201 325 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 NR2C1P13056 603 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 LIN54Q6MZP7 749 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 PEG10Q86TG7 708 aaKnown RBP13.05□□□□□ -0.32
TCOF1-207ENST00000504761 KDM8Q8N371 416 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 TMEM163Q8TC26 289 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 DDIT4LQ96D03 193 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 LMF2Q9BU23 707 aaKnown RBP13.05□□□□□ -0.32
TCOF1-207ENST00000504761 ASB4Q9Y574 426 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 PTHP01270 115 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 NID1P14543 1247 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 TRHRP34981 398 aaPredicted RBP13.05□□□□□ -0.32
TCOF1-207ENST00000504761 BICRALQ6AI39 1079 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 PFN4Q8NHR9 129 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 PNPLA2Q96AD5 504 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 ZG16BQ96DA0 208 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 OR2A5Q96R48 311 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 B4GALT7Q9UBV7 327 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 A0A1W2PS29 197 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 NUP62P37198 522 aaPredicted RBP13.05□□□□□ -0.32
TCOF1-207ENST00000504761 ILKQ13418 452 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 EFR3AQ14156 821 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 CRMP1Q14194 572 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 TUBA3EQ6PEY2 450 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 MBOAT2Q6ZWT7 520 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 GPBAR1Q8TDU6 330 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 HIST1H2AAQ96QV6 131 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 TEX13CA0A0J9YWL9 993 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 FAM172BPA6NC97 362 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 ALOX12BO75342 701 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 RGS6P49758 472 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms