RNA–Protein interactions for RNA: ENST00000502840.5

CDC42SE2-205, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-205ENST00000502840 PCCBP05166 539 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 RPLP0P05388 317 aaKnown RBP2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 KRT8P05787 483 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 RETP07949 1114 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 IL3P08700 152 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 CCDC159P0C7I6 412 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 NR2F1P10589 423 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 CCL5P13501 91 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 HLA-EP13747 358 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 ANXA8P13928 327 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 HOXB2P14652 356 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 TNNI3P19429 210 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 ITIH1P19827 911 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 IL11P20809 199 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 IDSP22304 550 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 GADD45AP24522 165 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 CXCR2P25025 360 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 GTF2E2P29084 291 aaKnown RBP2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 HLA-FP30511 346 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 CCKARP32238 428 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 CCKBRP32239 447 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 SOX6P35712 828 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 KRT20P35900 424 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 TGFBR1P36897 503 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 PIGAP37287 484 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 RPL3P39023 403 aaKnown RBP2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 MRPL19P49406 292 aaKnown RBP2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 PCYT1AP49585 367 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 CTSCP53634 463 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 AP1S2P56377 157 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 DEFA1P59665 94 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 DEFA3P59666 94 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 NANOS2P60321 138 aaKnown RBP2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 GABARAPL2P60520 117 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 NCS1P62166 190 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 SELENOWP63302 87 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 CSNK2BP67870 215 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 DEFB103AP81534 67 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 CDK6Q00534 326 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 RELAQ04206 551 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 MXD1Q05195 221 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 RUNX1T1Q06455 604 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 ELP6Q0PNE2 266 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 AQP6Q13520 282 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 KCNC3Q14003 757 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 GPNMBQ14956 572 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 MAD2L1BPQ15013 274 aaPredicted RBP2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 RGNQ15493 299 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 CDKN3Q16667 212 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 MICAQ29983 383 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 C2orf68Q2NKX9 166 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 GPAT3Q53EU6 434 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 PYCR3Q53H96 274 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 CCDC92Q53HC0 331 aaPredicted RBP2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 DCST1Q5T197 706 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 PMS2CLQ68D20 193 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 TYW3Q6IPR3 259 aaKnown RBP2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 TRIM40Q6P9F5 258 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 CASP12Q6UXS9 341 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 ZNF852Q6ZMS4 543 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 Q6ZSV7 163 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 USP43Q70EL4 1123 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 HMGN2P46Q86SG4 172 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 TRIM69Q86WT6 500 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 CALHM3Q86XJ0 350 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 RNF130Q86XS8 419 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 CACUL1Q86Y37 369 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 EGFL6Q8IUX8 553 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 SLC34A3Q8N130 599 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 C10orf111Q8N326 155 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 CHCHD4Q8N4Q1 142 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 RAB42Q8N4Z0 105 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 TRAM1L1Q8N609 369 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 SLC5A8Q8N695 610 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 L3MBTL4Q8NA19 623 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 OR7G3Q8NG95 312 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 HUS1BQ8NHY5 278 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 WDR36Q8NI36 951 aaKnown RBP2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 ZNF675Q8TD23 568 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 ADAMTS16Q8TE57 1224 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 SETD7Q8WTS6 366 aaKnown RBP2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 PHF10Q8WUB8 498 aaKnown RBP2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 CAPSLQ8WWF8 208 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 SLC5A11Q8WWX8 675 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 SUSD6Q92537 303 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 PROX1Q92786 737 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 RPL3LQ92901 407 aaKnown RBP2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 RAB8BQ92930 207 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 GLYATL1Q969I3 302 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 SLC38A4Q969I6 547 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 UBE2E3Q969T4 207 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 ERGIC1Q969X5 290 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 CIDECQ96AQ7 238 aaPredicted RBP2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 EXOSC8Q96B26 276 aaKnown RBP2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 TCEAL4Q96EI5 215 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 SLC41A2Q96JW4 573 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 CNDP2Q96KP4 475 aaKnown RBP2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 FAM210AQ96ND0 272 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 RDH12Q96NR8 316 aa2.87□□□□□ -1.95
CDC42SE2-205ENST00000502840 F2RL3Q96RI0 385 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms