RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 TRAV27A0A087WT01 109 aa16.71■□□□□ 0.27
LINC00535-201ENST00000501400 A0A087WUJ7 227 aa16.71■□□□□ 0.27
LINC00535-201ENST00000501400 LNP1A1A4G5 178 aa16.71■□□□□ 0.27
LINC00535-201ENST00000501400 C17orf51A8MQB3 221 aa16.71■□□□□ 0.27
LINC00535-201ENST00000501400 GNB5O14775 395 aa16.71■□□□□ 0.27
LINC00535-201ENST00000501400 REM1O75628 298 aa16.71■□□□□ 0.27
LINC00535-201ENST00000501400 ZNF883P0CG24 379 aa16.71■□□□□ 0.27
LINC00535-201ENST00000501400 SAGP10523 405 aaPredicted RBP16.71■□□□□ 0.27
LINC00535-201ENST00000501400 HPGDP15428 266 aa16.71■□□□□ 0.27
LINC00535-201ENST00000501400 CD36P16671 472 aa16.71■□□□□ 0.27
LINC00535-201ENST00000501400 IL11RAQ14626 422 aa16.71■□□□□ 0.27
LINC00535-201ENST00000501400 AADACL4Q5VUY2 407 aa16.71■□□□□ 0.27
LINC00535-201ENST00000501400 ZNF367Q7RTV3 350 aa16.71■□□□□ 0.27
LINC00535-201ENST00000501400 SLC34A3Q8N130 599 aa16.71■□□□□ 0.27
LINC00535-201ENST00000501400 OR52I1Q8NGK6 324 aa16.71■□□□□ 0.27
LINC00535-201ENST00000501400 RPL3LQ92901 407 aaKnown RBP16.71■□□□□ 0.27
LINC00535-201ENST00000501400 TMEM80Q96HE8 168 aa16.71■□□□□ 0.27
LINC00535-201ENST00000501400 SLC26A1Q9H2B4 701 aa16.71■□□□□ 0.27
LINC00535-201ENST00000501400 MED17Q9NVC6 651 aa16.71■□□□□ 0.27
LINC00535-201ENST00000501400 RPS6KB2Q9UBS0 482 aa16.71■□□□□ 0.27
LINC00535-201ENST00000501400 CLEC2DQ9UHP7 191 aa16.71■□□□□ 0.27
LINC00535-201ENST00000501400 CARD8Q9Y2G2 431 aa16.71■□□□□ 0.27
LINC00535-201ENST00000501400 EFCAB9A8MZ26 197 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 MEN1O00255 615 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 PTP4A3O75365 173 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 CCL4P13236 92 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 IL12BP29460 328 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 AVPR2P30518 371 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 LCN1P31025 176 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 CRYZQ08257 329 aaKnown RBP16.7■□□□□ 0.26
LINC00535-201ENST00000501400 NCF4Q15080 339 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 MRPL14Q6P1L8 145 aaKnown RBP16.7■□□□□ 0.26
LINC00535-201ENST00000501400 SLC46A3Q7Z3Q1 461 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 AGBL5Q8NDL9 886 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 ANKK1Q8NFD2 765 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 HSPBAP1Q96EW2 488 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 CRELD1Q96HD1 420 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 RXFP3Q9NSD7 469 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 MRPS18AQ9NVS2 196 aaKnown RBP16.7■□□□□ 0.26
LINC00535-201ENST00000501400 PPIEQ9UNP9 301 aaKnown RBP16.7■□□□□ 0.26
LINC00535-201ENST00000501400 IGKV1D-42A0A075B6H8 117 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 ZNF264O43296 627 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 CPNE3O75131 537 aaKnown RBP16.7■□□□□ 0.26
LINC00535-201ENST00000501400 ACP1P24666 158 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 RNF4P78317 190 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 SMARCD3Q6STE5 483 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 BPHLQ86WA6 291 aaPredicted RBP16.7■□□□□ 0.26
LINC00535-201ENST00000501400 CDK20Q8IZL9 346 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 BBS1Q8NFJ9 593 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 OR52L1Q8NGH7 329 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 DNAJA4Q8WW22 397 aaPredicted RBP16.7■□□□□ 0.26
LINC00535-201ENST00000501400 LGALS12Q96DT0 336 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 HINT3Q9NQE9 182 aaKnown RBP16.7■□□□□ 0.26
LINC00535-201ENST00000501400 ICAM5Q9UMF0 924 aa16.7■□□□□ 0.26
LINC00535-201ENST00000501400 ADAM10O14672 748 aa16.69■□□□□ 0.26
LINC00535-201ENST00000501400 KHNYNO15037 678 aaKnown RBP16.69■□□□□ 0.26
LINC00535-201ENST00000501400 LDOC1O95751 146 aaPredicted RBP16.69■□□□□ 0.26
LINC00535-201ENST00000501400 GP1BAP07359 652 aa16.69■□□□□ 0.26
LINC00535-201ENST00000501400 GRK5P34947 590 aa16.69■□□□□ 0.26
LINC00535-201ENST00000501400 CCR4P51679 360 aa16.69■□□□□ 0.26
LINC00535-201ENST00000501400 EMP2P54851 167 aa16.69■□□□□ 0.26
LINC00535-201ENST00000501400 ZNF117Q03924 483 aa16.69■□□□□ 0.26
LINC00535-201ENST00000501400 PLA2G2CQ5R387 149 aa16.69■□□□□ 0.26
LINC00535-201ENST00000501400 RNLSQ5VYX0 342 aa16.69■□□□□ 0.26
LINC00535-201ENST00000501400 RPL13AP3Q6NVV1 102 aa16.69■□□□□ 0.26
LINC00535-201ENST00000501400 PAPD4Q6PIY7 484 aaKnown RBP16.69■□□□□ 0.26
LINC00535-201ENST00000501400 PAQR6Q6TCH4 344 aa16.69■□□□□ 0.26
LINC00535-201ENST00000501400 C16orf47Q6ZP98 133 aaPredicted RBP16.69■□□□□ 0.26
LINC00535-201ENST00000501400 LNX2Q8N448 690 aa16.69■□□□□ 0.26
LINC00535-201ENST00000501400 MCCC2Q9HCC0 563 aa16.69■□□□□ 0.26
LINC00535-201ENST00000501400 DIMT1Q9UNQ2 313 aaKnown RBP16.69■□□□□ 0.26
LINC00535-201ENST00000501400 A0A1W2PQD3 144 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 ALG1L2C9J202 215 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 ZNF354AO60765 605 aaPredicted RBP16.68■□□□□ 0.26
LINC00535-201ENST00000501400 CSO75390 466 aaKnown RBP16.68■□□□□ 0.26
LINC00535-201ENST00000501400 RCBTB2O95199 551 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 APOL3O95236 402 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 VBP1P61758 197 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 COPZ1P61923 177 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 LSM3P62310 102 aaKnown RBP16.68■□□□□ 0.26
LINC00535-201ENST00000501400 ARMCX4Q5H9R4 360 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 ATG4DQ86TL0 474 aaPredicted RBP16.68■□□□□ 0.26
LINC00535-201ENST00000501400 CYP4Z2PQ8N1L4 340 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 TMCO5AQ8N6Q1 288 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 OR51A7Q8NH64 312 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 NDNFQ8TB73 568 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 RNFT2Q96EX2 444 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 LOXL4Q96JB6 756 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 CRB3Q9BUF7 120 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 PCDHGB2Q9Y5G2 931 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 PCDHGA5Q9Y5G8 931 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 LRRN3E7EW58 273 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 SLC22A1O15245 554 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 HCN1O60741 890 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 RAB36O95755 333 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 HMGN1P05114 100 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 BMP7P18075 431 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 MTNR1AP48039 350 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 PNLIPRP2P54317 469 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 NCS1P62166 190 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms