RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 ZNF614Q8N883 585 aa12.24□□□□□ -0.45
CCDC58-207ENST00000498466 APH1AQ96BI3 265 aa12.24□□□□□ -0.45
CCDC58-207ENST00000498466 TRMOQ9BU70 441 aa12.24□□□□□ -0.45
CCDC58-207ENST00000498466 PLA2G12AQ9BZM1 189 aa12.24□□□□□ -0.45
CCDC58-207ENST00000498466 HOXD1Q9GZZ0 328 aa12.24□□□□□ -0.45
CCDC58-207ENST00000498466 REEP4Q9H6H4 257 aa12.24□□□□□ -0.45
CCDC58-207ENST00000498466 ANKZF1Q9H8Y5 726 aa12.24□□□□□ -0.45
CCDC58-207ENST00000498466 FKRPQ9H9S5 495 aa12.24□□□□□ -0.45
CCDC58-207ENST00000498466 DUSP22Q9NRW4 184 aa12.24□□□□□ -0.45
CCDC58-207ENST00000498466 ZCCHC3Q9NUD5 404 aaKnown RBP12.24□□□□□ -0.45
CCDC58-207ENST00000498466 ASB6Q9NWX5 421 aa12.24□□□□□ -0.45
CCDC58-207ENST00000498466 TAS2R16Q9NYV7 291 aa12.24□□□□□ -0.45
CCDC58-207ENST00000498466 NOSIPQ9Y314 301 aaKnown RBP12.24□□□□□ -0.45
CCDC58-207ENST00000498466 TRAF6Q9Y4K3 522 aa12.24□□□□□ -0.45
CCDC58-207ENST00000498466 IGHV4-61A0A0C4DH41 118 aa12.23□□□□□ -0.45
CCDC58-207ENST00000498466 SPRY1O43609 319 aaPredicted RBP12.23□□□□□ -0.45
CCDC58-207ENST00000498466 H6PDO95479 791 aa12.23□□□□□ -0.45
CCDC58-207ENST00000498466 HMGN2P05204 90 aaKnown RBP12.23□□□□□ -0.45
CCDC58-207ENST00000498466 GSTA1P08263 222 aa12.23□□□□□ -0.45
CCDC58-207ENST00000498466 EFNA1P20827 205 aaPredicted RBP12.23□□□□□ -0.45
CCDC58-207ENST00000498466 FRKP42685 505 aaPredicted RBP12.23□□□□□ -0.45
CCDC58-207ENST00000498466 DIO1P49895 249 aa12.23□□□□□ -0.45
CCDC58-207ENST00000498466 CBFBQ13951 182 aa12.23□□□□□ -0.45
CCDC58-207ENST00000498466 LASP1Q14847 261 aaKnown RBP12.23□□□□□ -0.45
CCDC58-207ENST00000498466 KIAA0040Q15053 153 aa12.23□□□□□ -0.45
CCDC58-207ENST00000498466 CR1LQ2VPA4 569 aa12.23□□□□□ -0.45
CCDC58-207ENST00000498466 SLC25A53Q5H9E4 307 aa12.23□□□□□ -0.45
CCDC58-207ENST00000498466 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.23□□□□□ -0.45
CCDC58-207ENST00000498466 OR7E24Q6IFN5 339 aa12.23□□□□□ -0.45
CCDC58-207ENST00000498466 C8orf74Q6P047 294 aa12.23□□□□□ -0.45
CCDC58-207ENST00000498466 CDC73Q6P1J9 531 aa12.23□□□□□ -0.45
CCDC58-207ENST00000498466 C12orf54Q6X4T0 127 aa12.23□□□□□ -0.45
CCDC58-207ENST00000498466 TOR1AIP2Q8NFQ8 470 aa12.23□□□□□ -0.45
CCDC58-207ENST00000498466 OR5W2Q8NH69 310 aa12.23□□□□□ -0.45
CCDC58-207ENST00000498466 ZNF524Q96C55 264 aa12.23□□□□□ -0.45
CCDC58-207ENST00000498466 FBXO17Q96EF6 278 aa12.23□□□□□ -0.45
CCDC58-207ENST00000498466 FAM120BQ96EK7 910 aaKnown RBP12.23□□□□□ -0.45
CCDC58-207ENST00000498466 ZNF764Q96H86 408 aaPredicted RBP12.23□□□□□ -0.45
CCDC58-207ENST00000498466 C1orf159Q96HA4 380 aa12.23□□□□□ -0.45
CCDC58-207ENST00000498466 TSSK3Q96PN8 268 aa12.23□□□□□ -0.45
CCDC58-207ENST00000498466 STACQ99469 402 aa12.23□□□□□ -0.45
CCDC58-207ENST00000498466 PIGUQ9H490 435 aa12.23□□□□□ -0.45
CCDC58-207ENST00000498466 ACSS1Q9NUB1 689 aaPredicted RBP12.23□□□□□ -0.45
CCDC58-207ENST00000498466 SULT2B1O00204 365 aa12.22□□□□□ -0.45
CCDC58-207ENST00000498466 ATP12AP54707 1039 aa12.22□□□□□ -0.45
CCDC58-207ENST00000498466 CSNK2A1P68400 391 aaPredicted RBP12.22□□□□□ -0.45
CCDC58-207ENST00000498466 PHC1P78364 1004 aa12.22□□□□□ -0.45
CCDC58-207ENST00000498466 MLC1Q15049 377 aa12.22□□□□□ -0.45
CCDC58-207ENST00000498466 GABRA6Q16445 453 aa12.22□□□□□ -0.45
CCDC58-207ENST00000498466 TIGD2Q4W5G0 525 aa12.22□□□□□ -0.45
CCDC58-207ENST00000498466 EXOSC6Q5RKV6 272 aaKnown RBP12.22□□□□□ -0.45
CCDC58-207ENST00000498466 DCST2Q5T1A1 773 aa12.22□□□□□ -0.45
CCDC58-207ENST00000498466 ABLIM2Q6H8Q1 611 aa12.22□□□□□ -0.45
CCDC58-207ENST00000498466 LCA5Q86VQ0 697 aa12.22□□□□□ -0.45
CCDC58-207ENST00000498466 MEX3DQ86XN8 651 aaKnown RBP12.22□□□□□ -0.45
CCDC58-207ENST00000498466 CLHC1Q8NHS4 586 aa12.22□□□□□ -0.45
CCDC58-207ENST00000498466 METTL2AQ96IZ6 378 aaKnown RBP12.22□□□□□ -0.45
CCDC58-207ENST00000498466 MUS81Q96NY9 551 aa12.22□□□□□ -0.45
CCDC58-207ENST00000498466 FOXN4Q96NZ1 517 aa12.22□□□□□ -0.45
CCDC58-207ENST00000498466 SORCS2Q96PQ0 1159 aa12.22□□□□□ -0.45
CCDC58-207ENST00000498466 QRSL1Q9H0R6 528 aaKnown RBP12.22□□□□□ -0.45
CCDC58-207ENST00000498466 SERINC1Q9NRX5 453 aa12.22□□□□□ -0.45
CCDC58-207ENST00000498466 DTNAQ9Y4J8 743 aa12.22□□□□□ -0.45
CCDC58-207ENST00000498466 IGKV3D-15A0A087WSY6 115 aa12.21□□□□□ -0.45
CCDC58-207ENST00000498466 LOC390937A0A1W2PQ73 354 aa12.21□□□□□ -0.45
CCDC58-207ENST00000498466 NPIPB8E9PQR5 432 aa12.21□□□□□ -0.45
CCDC58-207ENST00000498466 ZNF264O43296 627 aa12.21□□□□□ -0.45
CCDC58-207ENST00000498466 TBX19O60806 448 aa12.21□□□□□ -0.45
CCDC58-207ENST00000498466 UBL4AP11441 157 aa12.21□□□□□ -0.45
CCDC58-207ENST00000498466 ITGA2P17301 1181 aa12.21□□□□□ -0.45
CCDC58-207ENST00000498466 SDC1P18827 310 aa12.21□□□□□ -0.45
CCDC58-207ENST00000498466 CFPP27918 469 aa12.21□□□□□ -0.45
CCDC58-207ENST00000498466 SRP14P37108 136 aaKnown RBP12.21□□□□□ -0.45
CCDC58-207ENST00000498466 TIFABQ6ZNK6 161 aa12.21□□□□□ -0.45
CCDC58-207ENST00000498466 TMPPEQ6ZT21 453 aa12.21□□□□□ -0.45
CCDC58-207ENST00000498466 MTDHQ86UE4 582 aaKnown RBP12.21□□□□□ -0.45
CCDC58-207ENST00000498466 ADAMTS15Q8TE58 950 aa12.21□□□□□ -0.45
CCDC58-207ENST00000498466 CCT7Q99832 543 aa12.21□□□□□ -0.45
CCDC58-207ENST00000498466 TSPYL1Q9H0U9 437 aa12.21□□□□□ -0.45
CCDC58-207ENST00000498466 SIRT3Q9NTG7 399 aaPredicted RBP12.21□□□□□ -0.45
CCDC58-207ENST00000498466 C1orf109Q9NX04 203 aa12.21□□□□□ -0.45
CCDC58-207ENST00000498466 CCL27Q9Y4X3 112 aa12.21□□□□□ -0.45
CCDC58-207ENST00000498466 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.21□□□□□ -0.45
CCDC58-207ENST00000498466 MALRD1Q5VYJ5 2156 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 A0A087WUV0 522 aaPredicted RBP12.2□□□□□ -0.46
CCDC58-207ENST00000498466 EXOC1LA0A1B0GW35 172 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 ATP6V1G2-DDX39BF2Z307 99 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 H3BQF6 201 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 ETV2O00321 342 aaPredicted RBP12.2□□□□□ -0.46
CCDC58-207ENST00000498466 SLC28A1O00337 649 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 EIF4E2O60573 245 aaKnown RBP12.2□□□□□ -0.46
CCDC58-207ENST00000498466 MRPL33O75394 65 aaKnown RBP12.2□□□□□ -0.46
CCDC58-207ENST00000498466 CYP7B1O75881 506 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 ITGA5P08648 1049 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 UROSP10746 265 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 ZNF23P17027 643 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 PRPH2P23942 346 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 CASQ1P31415 396 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 FOXG1P55316 489 aaPredicted RBP12.2□□□□□ -0.46
CCDC58-207ENST00000498466 SNRPD2P62316 118 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms