RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 SLC25A36Q96CQ1 311 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 FN3KQ9H479 309 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 MMP25Q9NPA2 562 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 B3GAT2Q9NPZ5 323 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 NDRG4Q9ULP0 352 aaKnown RBP7.7□□□□□ -1.18
USP54-215ENST00000497106 PHYHO14832 338 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 SNX4O95219 450 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 ONECUT2O95948 504 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 FUT1P19526 365 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 RPS4Y1P22090 263 aaKnown RBP7.7□□□□□ -1.18
USP54-215ENST00000497106 PLA2G2CQ5R387 149 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 DHRS13Q6UX07 377 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 CLIP4Q8N3C7 705 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 THRSPQ92748 146 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 SPACA9Q96E40 222 aaPredicted RBP7.7□□□□□ -1.18
USP54-215ENST00000497106 TMEM43Q9BTV4 400 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 DPH1Q9BZG8 443 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 OR52D1Q9H346 318 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 INPP5EQ9NRR6 644 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 SEC14L4Q9UDX3 406 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 POLR1DQ9Y2S0 133 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 NEUROG3Q9Y4Z2 214 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 ANKUB1A6NFN9 424 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 PRODHO43272 600 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 ICOSLGO75144 302 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 HLA-DQA2P01906 255 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 IDUAP35475 653 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 GIPRP48546 466 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 PRAMEF17Q5VTA0 474 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 PLAG1Q6DJT9 500 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 KLHL17Q6TDP4 642 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 ANKRD13BQ86YJ7 626 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 UTP23Q9BRU9 249 aaKnown RBP7.7□□□□□ -1.18
USP54-215ENST00000497106 ZNF700Q9H0M5 742 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 DNAJB12Q9NXW2 375 aaKnown RBP7.7□□□□□ -1.18
USP54-215ENST00000497106 GALNT8Q9NY28 637 aa7.7□□□□□ -1.18
USP54-215ENST00000497106 THADAQ6YHU6 1953 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.69□□□□□ -1.18
USP54-215ENST00000497106 A8MVM7 634 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 OR7A10O76100 309 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 SERPINA7P05543 415 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 DAP3P51398 398 aaKnown RBP7.69□□□□□ -1.18
USP54-215ENST00000497106 NOVA1P51513 510 aaKnown RBP7.69□□□□□ -1.18
USP54-215ENST00000497106 RPS3AP61247 264 aaKnown RBP7.69□□□□□ -1.18
USP54-215ENST00000497106 CSNK2A1P68400 391 aaPredicted RBP7.69□□□□□ -1.18
USP54-215ENST00000497106 ZNF574Q6ZN55 896 aaPredicted RBP7.69□□□□□ -1.18
USP54-215ENST00000497106 C10orf111Q8N326 155 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 BRIX1Q8TDN6 353 aaKnown RBP7.69□□□□□ -1.18
USP54-215ENST00000497106 STK35Q8TDR2 534 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 ERMAPQ96PL5 475 aaPredicted RBP7.69□□□□□ -1.18
USP54-215ENST00000497106 MBOAT4Q96T53 435 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 ADAM30Q9UKF2 790 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 SSR3Q9UNL2 185 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 RNF6Q9Y252 685 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 PCDHGA6Q9Y5G7 932 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 MAGED1Q9Y5V3 778 aaPredicted RBP7.69□□□□□ -1.18
USP54-215ENST00000497106 A0A0B4J2E0 115 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 A0A1B0GX12 115 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 ZNF726A6NNF4 738 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 RNF13O43567 381 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 TACSTD2P09758 323 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 CCL4P13236 92 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 CSRP1P21291 193 aaKnown RBP7.69□□□□□ -1.18
USP54-215ENST00000497106 ELK4P28324 431 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 GABREP78334 506 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 MED22Q15528 200 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 OCLNQ16625 522 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 TBPL2Q6SJ96 375 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 TMEM205Q6UW68 189 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 LANCL3Q6ZV70 420 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 P2RY8Q86VZ1 359 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 MCEMP1Q8IX19 187 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 CNIH3Q8TBE1 160 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 CT55Q8WUE5 264 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 NXPE2Q96DL1 559 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 MRGPRX4Q96LA9 322 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 PLCXD1Q9NUJ7 323 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 PCM1Q15154 2024 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 A0A087WUU8 490 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 IGHV3-20A0A0C4DH32 117 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 GMFGO60234 142 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 DDAH2O95865 285 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 CH25HO95992 272 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 CD46P15529 392 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 ABCD3P28288 659 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 TACR3P29371 465 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 RAB40BQ12829 278 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 MRPL28Q13084 256 aaKnown RBP7.69□□□□□ -1.18
USP54-215ENST00000497106 PUM1Q14671 1186 aaKnown RBP eCLIP7.69□□□□□ -1.18
USP54-215ENST00000497106 INAQ16352 499 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 ALG10Q5BKT4 473 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 THOC7Q6I9Y2 204 aaKnown RBP7.69□□□□□ -1.18
USP54-215ENST00000497106 NCCRP1Q6ZVX7 275 aaPredicted RBP7.69□□□□□ -1.18
USP54-215ENST00000497106 USP51Q70EK9 711 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 LSMEM1Q8N8F7 131 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 OR1J4Q8NGS1 313 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 UFD1Q92890 307 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 SAMD8Q96LT4 415 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 ZNF160Q9HCG1 818 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 TCFL5Q9UL49 500 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms