RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 FRMPD3Q5JV73 1810 aa1.72□□□□□ -2.13
VPS26A-208ENST00000497022 SPAG9O60271 1321 aaKnown RBP1.71□□□□□ -2.14
VPS26A-208ENST00000497022 CUX2O14529 1486 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 A0A0G2JRQ6 117 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 RNF103-CHMP3A0A140T963 221 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 SYCE3A1L190 88 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 KRT87PA6NCN2 255 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 LRRC30A6NM36 301 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 PP2D1A8MPX8 630 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 WASH3PC4AMC7 463 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 H3BMQ9 156 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 SULT2B1O00204 365 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 LGALS8O00214 317 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 OR10H3O60404 316 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 ECI2O75521 394 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 LALBAP00709 142 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 IGKV1-17P01599 117 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 PTMAP06454 111 aaKnown RBP1.71□□□□□ -2.14
VPS26A-208ENST00000497022 RNH1P13489 461 aaKnown RBP1.71□□□□□ -2.14
VPS26A-208ENST00000497022 GAP43P17677 238 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 IGFBP3P17936 291 aaPredicted RBP1.71□□□□□ -2.14
VPS26A-208ENST00000497022 IL10P22301 178 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 MAPK3P27361 379 aaPredicted RBP1.71□□□□□ -2.14
VPS26A-208ENST00000497022 CALRP27797 417 aaKnown RBP1.71□□□□□ -2.14
VPS26A-208ENST00000497022 CD86P42081 329 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 RPS9P46781 194 aaKnown RBP1.71□□□□□ -2.14
VPS26A-208ENST00000497022 TFPI2P48307 235 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 PLK1P53350 603 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 SH3BGRP55822 239 aaPredicted RBP1.71□□□□□ -2.14
VPS26A-208ENST00000497022 OSTNP61366 133 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 NTHL1P78549 312 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 CCDC173Q0VFZ6 552 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 PDIA5Q14554 519 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 TIGITQ495A1 244 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 LINC00483Q53H64 154 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 GPR157Q5UAW9 335 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 LIPNQ5VXI9 398 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 OR52W1Q6IF63 320 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 WASH2PQ6VEQ5 465 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 WDR88Q6ZMY6 472 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 COX15Q7KZN9 410 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 CATSPER4Q7RTX7 472 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 EFCAB13Q8IY85 973 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 PNKDQ8N490 385 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 MRPL43Q8N983 215 aaKnown RBP1.71□□□□□ -2.14
VPS26A-208ENST00000497022 CNIH3Q8TBE1 160 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 ZNF596Q8TC21 504 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 M1APQ8TC57 530 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 SLC22A8Q8TCC7 542 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 DQX1Q8TE96 717 aaKnown RBP1.71□□□□□ -2.14
VPS26A-208ENST00000497022 AENQ8WTP8 325 aaKnown RBP1.71□□□□□ -2.14
VPS26A-208ENST00000497022 SLC13A3Q8WWT9 602 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 CHCHD10Q8WYQ3 142 aaPredicted RBP1.71□□□□□ -2.14
VPS26A-208ENST00000497022 TMEM158Q8WZ71 300 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 RUFY1Q96T51 708 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 ATG10Q9H0Y0 220 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 C1orf21Q9H246 121 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 TPK1Q9H3S4 243 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 FETUBQ9UGM5 382 aa1.71□□□□□ -2.14
VPS26A-208ENST00000497022 NUFIP1Q9UHK0 495 aaKnown RBP1.71□□□□□ -2.14
VPS26A-208ENST00000497022 HELTA6NFD8 242 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 SLC9B1P1A6NJY1 282 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 PRPSAP2O60256 369 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 B3GALNT1O75752 331 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 SLITRK3O94933 977 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 CLUP10909 449 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 CRISP2P16562 243 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 AHCYP23526 432 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 HSPA1LP34931 641 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 MNAT1P51948 309 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 MTTPP55157 894 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 ACTA1P68133 377 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 CHRNB3Q05901 458 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 LAGE3Q14657 143 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 C1orf146Q5VVC0 180 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 FAM199XQ6PEV8 388 aaPredicted RBP1.7□□□□□ -2.14
VPS26A-208ENST00000497022 RFLNAQ6ZTI6 216 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 LINC01561Q8N1V8 128 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 HDDC3Q8N4P3 179 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 NKAPP1Q8N9T2 125 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 OR6X1Q8NH79 312 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 PAQR8Q8TEZ7 354 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 PGLYRP4Q96LB8 373 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 SLC30A2Q9BRI3 323 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 XPO4Q9C0E2 1151 aaKnown RBP1.7□□□□□ -2.14
VPS26A-208ENST00000497022 TMEM231Q9H6L2 316 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 EML4Q9HC35 981 aaKnown RBP1.7□□□□□ -2.14
VPS26A-208ENST00000497022 POLD4Q9HCU8 107 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 HPF1Q9NWY4 346 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 MRPL39Q9NYK5 338 aaKnown RBP1.7□□□□□ -2.14
VPS26A-208ENST00000497022 AP4B1Q9Y6B7 739 aa1.7□□□□□ -2.14
VPS26A-208ENST00000497022 MAP3K15Q6ZN16 1313 aa1.69□□□□□ -2.14
VPS26A-208ENST00000497022 CFAP73A6NFT4 308 aa1.69□□□□□ -2.14
VPS26A-208ENST00000497022 ARHGAP42A6NI28 874 aa1.69□□□□□ -2.14
VPS26A-208ENST00000497022 C11orf94C9JXX5 98 aa1.69□□□□□ -2.14
VPS26A-208ENST00000497022 KIAA0754O94854 1291 aa1.69□□□□□ -2.14
VPS26A-208ENST00000497022 MOSP00540 346 aa1.69□□□□□ -2.14
VPS26A-208ENST00000497022 ALPPP05187 535 aa1.69□□□□□ -2.14
VPS26A-208ENST00000497022 RETP07949 1114 aa1.69□□□□□ -2.14
VPS26A-208ENST00000497022 DPP4P27487 766 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 5.7 ms