RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 ACER3Q9NUN7 267 aa11.36□□□□□ -0.59
PTPRF-214ENST00000496043 MARCOQ9UEW3 520 aaPredicted RBP11.36□□□□□ -0.59
PTPRF-214ENST00000496043 SLC35A3Q9Y2D2 325 aa11.36□□□□□ -0.59
PTPRF-214ENST00000496043 ITPR3Q14573 2671 aa11.36□□□□□ -0.59
PTPRF-214ENST00000496043 A0A1W2PNR3 127 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 CCDC154A6NI56 674 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 SDHDO14521 159 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 HDAC3O15379 428 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 DIAPH2O60879 1101 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 SMPD2O60906 423 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 ERLIN1O75477 346 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 UBTFL6P0CB48 400 aaPredicted RBP11.35□□□□□ -0.59
PTPRF-214ENST00000496043 KITP10721 976 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 ENPP1P22413 925 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 APOBEC1P41238 236 aaKnown RBP11.35□□□□□ -0.59
PTPRF-214ENST00000496043 ANXA11P50995 505 aaKnown RBP11.35□□□□□ -0.59
PTPRF-214ENST00000496043 SLC18A1P54219 525 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 KCNJ10P78508 379 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 TXNL4AP83876 142 aaKnown RBP11.35□□□□□ -0.59
PTPRF-214ENST00000496043 MERTKQ12866 999 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 MAPK14Q16539 360 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 GPAT3Q53EU6 434 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 TYW3Q6IPR3 259 aaKnown RBP11.35□□□□□ -0.59
PTPRF-214ENST00000496043 C3orf33Q6P1S2 294 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 ZNF621Q6ZSS3 439 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 LRRC75A-AS1Q8N1F1 130 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 ZNF619Q8N2I2 560 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 GLB1L3Q8NCI6 653 aaPredicted RBP11.35□□□□□ -0.59
PTPRF-214ENST00000496043 WFDC11Q8NEX6 87 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 ZNF563Q8TA94 476 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 MGARPQ8TDB4 240 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 ZG16BQ96DA0 208 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 TEX37Q96LM6 180 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 OR5B2Q96R09 309 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 OR52E6Q96RD3 313 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 PANX1Q96RD7 426 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 QRSL1Q9H0R6 528 aaKnown RBP11.35□□□□□ -0.59
PTPRF-214ENST00000496043 WDR55Q9H6Y2 383 aaPredicted RBP11.35□□□□□ -0.59
PTPRF-214ENST00000496043 MANSC1Q9H8J5 431 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 COQ10BQ9H8M1 238 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 AIG1Q9NVV5 245 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 NKIRAS1Q9NYS0 192 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 KLHL9Q9P2J3 617 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 KLHL13Q9P2N7 655 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 LIPT1Q9Y234 373 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 GPR45Q9Y5Y3 372 aa11.35□□□□□ -0.59
PTPRF-214ENST00000496043 CELSR1Q9NYQ6 3014 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 GOLGA8QA0A0J9YX86 632 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 CENPVL1A0A0U1RR11 272 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.34□□□□□ -0.59
PTPRF-214ENST00000496043 GOLGA8OA6NCC3 632 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 GOLGA8NF8WBI6 632 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 HMGN4O00479 90 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 KIAA0513O60268 411 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 SNNO75324 88 aaPredicted RBP11.34□□□□□ -0.59
PTPRF-214ENST00000496043 PGRP06401 933 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 ALDOCP09972 364 aaKnown RBP11.34□□□□□ -0.59
PTPRF-214ENST00000496043 FKBP2P26885 142 aaKnown RBP11.34□□□□□ -0.59
PTPRF-214ENST00000496043 LOXP28300 417 aaPredicted RBP11.34□□□□□ -0.59
PTPRF-214ENST00000496043 EPHA3P29320 983 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 IL12AP29459 219 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 PGM1P36871 562 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 NR1H2P55055 460 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 HPCAP84074 193 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 CHRNEQ04844 493 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 RASGEF1BQ0VAM2 473 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 SFRP5Q5T4F7 317 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 NXNQ6DKJ4 435 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 FRRS1Q6ZNA5 592 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 C20orf204Q6ZNR8 217 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 TMPPEQ6ZT21 453 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 PLEKHM3Q6ZWE6 761 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 RNF130Q86XS8 419 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 WFDC8Q8IUA0 241 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 RAB3IL1Q8TBN0 382 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 PMM1Q92871 262 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 TRNT1Q96Q11 434 aaKnown RBP11.34□□□□□ -0.59
PTPRF-214ENST00000496043 HS3ST6Q96QI5 342 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 USB1Q9BQ65 265 aaKnown RBP11.34□□□□□ -0.59
PTPRF-214ENST00000496043 MTHFD2LQ9H903 347 aaPredicted RBP11.34□□□□□ -0.59
PTPRF-214ENST00000496043 DLL4Q9NR61 685 aa11.34□□□□□ -0.59
PTPRF-214ENST00000496043 SPIN1Q9Y657 262 aaPredicted RBP11.34□□□□□ -0.59
PTPRF-214ENST00000496043 IGHV3-15A0A0B4J1V0 119 aa11.33□□□□□ -0.6
PTPRF-214ENST00000496043 SULT2B1O00204 365 aa11.33□□□□□ -0.6
PTPRF-214ENST00000496043 CYTIPO60759 359 aa11.33□□□□□ -0.6
PTPRF-214ENST00000496043 GCM2O75603 506 aaPredicted RBP11.33□□□□□ -0.6
PTPRF-214ENST00000496043 SLC22A3O75751 556 aa11.33□□□□□ -0.6
PTPRF-214ENST00000496043 H6PDO95479 791 aa11.33□□□□□ -0.6
PTPRF-214ENST00000496043 KRT75O95678 551 aa11.33□□□□□ -0.6
PTPRF-214ENST00000496043 ADAP00813 363 aa11.33□□□□□ -0.6
PTPRF-214ENST00000496043 IL6P05231 212 aa11.33□□□□□ -0.6
PTPRF-214ENST00000496043 TFPIP10646 304 aa11.33□□□□□ -0.6
PTPRF-214ENST00000496043 IL32P24001 234 aa11.33□□□□□ -0.6
PTPRF-214ENST00000496043 RYKP34925 604 aa11.33□□□□□ -0.6
PTPRF-214ENST00000496043 CLK1P49759 484 aaKnown RBP11.33□□□□□ -0.6
PTPRF-214ENST00000496043 MAGOHP61326 146 aaKnown RBP11.33□□□□□ -0.6
PTPRF-214ENST00000496043 CSNK2A1P68400 391 aaPredicted RBP11.33□□□□□ -0.6
PTPRF-214ENST00000496043 P2RY6Q15077 328 aa11.33□□□□□ -0.6
PTPRF-214ENST00000496043 ALKBH2Q6NS38 261 aa11.33□□□□□ -0.6
PTPRF-214ENST00000496043 TFAP2EQ6VUC0 442 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms