RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	LINC00528	Q8N1L1	170 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	DPP10	Q8N608	796 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	TMCO5A	Q8N6Q1	288 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	FBXO27	Q8NI29	283 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	ADGRG7	Q96K78	797 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	NPAS1	Q99742	590 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	KLHDC3	Q9BQ90	382 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	PINK1	Q9BXM7	581 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	PIGM	Q9H3S5	423 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	TIGAR	Q9NQ88	270 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	JKAMP	Q9P055	326 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	SLAMF8	Q9P0V8	285 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	LEF1	Q9UJU2	399 aa	Predicted RBP	11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	ZNF232	Q9UNY5	417 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	TRBV5-3	A0A0A0MS03	114 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	EVPLL	A8MZ36	301 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	ANGPT2	O15123	496 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	EFNA2	O43921	213 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	CYP7B1	O75881	506 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	THBS1	P07996	1170 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	GPX2	P18283	190 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	FKBP2	P26885	142 aa	Known RBP	11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	ADSL	P30566	484 aa	Predicted RBP	11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	EIF1AX	P47813	144 aa	Known RBP	11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	CCR4	P51679	360 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	FOXF2	Q12947	444 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	CTU2	Q2VPK5	515 aa	Known RBP	11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	DLEU7	Q6UYE1	221 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	MEX3B	Q6ZN04	569 aa	Known RBP	11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	MSRB3	Q8IXL7	192 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	RELL2	Q8NC24	303 aa	Predicted RBP	11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	OR10D3	Q8NH80	312 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	OR2V1	Q8NHB1	315 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	WDR60	Q8WVS4	1066 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	SMPDL3B	Q92485	455 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	INTS12	Q96CB8	462 aa	Known RBP	11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	KLHL15	Q96M94	604 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	QRSL1	Q9H0R6	528 aa	Known RBP	11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	ARMC7	Q9H6L4	198 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	RNF122	Q9H9V4	155 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	BCL2L10	Q9HD36	194 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	SERINC1	Q9NRX5	453 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	ACER3	Q9NUN7	267 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	VAPA	Q9P0L0	249 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	KLHL14	Q9P2G3	628 aa		11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	PHF3	Q92576	2039 aa	Known RBP	11.11	□□□□□ -0.63
MRPL55-233	ENST00000495899	NUP214	P35658	2090 aa	Predicted RBP	11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899		A0A0J9YW62	118 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899		A0A1W2PNV4	684 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	CYSRT1	A8MQ03	144 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	FAAH	O00519	579 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	SYNGR4	O95473	234 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	BCHE	P06276	602 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	PABPC4L	P0CB38	370 aa	Known RBP	11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	UQCRB	P14927	111 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	CD1E	P15812	388 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	IL11	P20809	199 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	APOBEC1	P41238	236 aa	Known RBP	11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	HTR3A	P46098	478 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	CARD18	P57730	90 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	SESN3	P58005	492 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	SELENBP1	Q13228	472 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	LARS2	Q15031	903 aa	Known RBP	11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	PON3	Q15166	354 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	LIN52	Q52LA3	116 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	RUNDC3A	Q59EK9	446 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	HBM	Q6B0K9	141 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	GTF2IRD2B	Q6EKJ0	949 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	CGB2	Q6NT52	195 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	GTF2IRD2	Q86UP8	949 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	DMRTC2	Q8IXT2	367 aa	Predicted RBP	11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	ZNF440	Q8IYI8	595 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	OR52P1P	Q8NH57	321 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	FNDC9	Q8TBE3	224 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	FIG4	Q92562	907 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	CNOT9	Q92600	299 aa	Known RBP	11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	OSTF1	Q92882	214 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	RNASE6	Q93091	150 aa	Known RBP	11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	ZNF524	Q96C55	264 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	TMEM19	Q96HH6	336 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	ZNF845	Q96IR2	970 aa	Predicted RBP	11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	ZNF317	Q96PQ6	595 aa	Predicted RBP	11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	TMEM38A	Q9H6F2	299 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	CACYBP	Q9HB71	228 aa	Known RBP	11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	GLRX2	Q9NS18	164 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	DNAJB12	Q9NXW2	375 aa	Known RBP	11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	MCTS1	Q9ULC4	181 aa	Known RBP	11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	IFT52	Q9Y366	437 aa		11.1	□□□□□ -0.63
MRPL55-233	ENST00000495899	CDHR4	A6H8M9	788 aa		11.09	□□□□□ -0.63
MRPL55-233	ENST00000495899	CLDN24	A6NM45	220 aa		11.09	□□□□□ -0.63
MRPL55-233	ENST00000495899	C5orf58	C9J3I9	102 aa		11.09	□□□□□ -0.63
MRPL55-233	ENST00000495899	TNFSF11	O14788	317 aa		11.09	□□□□□ -0.63
MRPL55-233	ENST00000495899	SLC22A2	O15244	555 aa		11.09	□□□□□ -0.63
MRPL55-233	ENST00000495899	CXCL13	O43927	109 aa		11.09	□□□□□ -0.63
MRPL55-233	ENST00000495899	BCAS1	O75363	584 aa	Predicted RBP	11.09	□□□□□ -0.63
MRPL55-233	ENST00000495899	TNFSF13	O75888	250 aa		11.09	□□□□□ -0.63
MRPL55-233	ENST00000495899	PGM3	O95394	542 aa		11.09	□□□□□ -0.63
MRPL55-233	ENST00000495899	NPPA	P01160	153 aa		11.09	□□□□□ -0.63
MRPL55-233	ENST00000495899	ETS2	P15036	469 aa		11.09	□□□□□ -0.63
MRPL55-233	ENST00000495899	SSTR2	P30874	369 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms