RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 CT45A9P0DMV2 189 aa14.96□□□□□ -0.01
CBX4-204ENST00000495122 FOLR1P15328 257 aa14.96□□□□□ -0.01
CBX4-204ENST00000495122 PSMB9P28065 219 aa14.96□□□□□ -0.01
CBX4-204ENST00000495122 RHAGQ02094 409 aa14.96□□□□□ -0.01
CBX4-204ENST00000495122 PRKCDQ05655 676 aa14.96□□□□□ -0.01
CBX4-204ENST00000495122 KCNAB1Q14722 419 aa14.96□□□□□ -0.01
CBX4-204ENST00000495122 KLHL22Q53GT1 634 aa14.96□□□□□ -0.01
CBX4-204ENST00000495122 CT45A2Q5DJT8 189 aa14.96□□□□□ -0.01
CBX4-204ENST00000495122 SNAP47Q5SQN1 464 aa14.96□□□□□ -0.01
CBX4-204ENST00000495122 TMEM236Q5W0B7 351 aa14.96□□□□□ -0.01
CBX4-204ENST00000495122 HMGN2P46Q86SG4 172 aa14.96□□□□□ -0.01
CBX4-204ENST00000495122 TMEM151BQ8IW70 566 aa14.96□□□□□ -0.01
CBX4-204ENST00000495122 EXD3Q8N9H8 876 aa14.96□□□□□ -0.01
CBX4-204ENST00000495122 POGLUT1Q8NBL1 392 aa14.96□□□□□ -0.01
CBX4-204ENST00000495122 PLPP5Q8NEB5 264 aa14.96□□□□□ -0.01
CBX4-204ENST00000495122 TMEM163Q8TC26 289 aa14.96□□□□□ -0.01
CBX4-204ENST00000495122 BRIX1Q8TDN6 353 aaKnown RBP14.96□□□□□ -0.01
CBX4-204ENST00000495122 TMEM239Q8WW34 195 aa14.96□□□□□ -0.01
CBX4-204ENST00000495122 PRSS27Q9BQR3 290 aa14.96□□□□□ -0.01
CBX4-204ENST00000495122 DNAJB12Q9NXW2 375 aaKnown RBP14.96□□□□□ -0.01
CBX4-204ENST00000495122 IGLV3-12A0A075B6K2 115 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 A0A0B4J2E0 115 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 CENPVL1A0A0U1RR11 272 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 A0A1B0GX12 115 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 A8MU76 341 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 CDC123O75794 336 aaPredicted RBP14.95□□□□□ -0.02
CBX4-204ENST00000495122 ATE1O95260 518 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 IL33O95760 270 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 BCL10O95999 233 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 IGF2P01344 180 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 CLPSP04118 112 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 THY1P04216 161 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 IGKV3-11P04433 115 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 ALAS2P22557 587 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 HTR2AP28223 471 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 MAP2K4P45985 399 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 SLC37A1P57057 533 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 MC2RQ01718 297 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 PDZK1Q5T2W1 519 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 DCAF12Q5T6F0 453 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 ZNF620Q6ZNG0 422 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 SLC16A12Q6ZSM3 486 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 TMPRSS11FQ6ZWK6 438 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 PRICKLE2Q7Z3G6 844 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 NKAIN4Q8IVV8 208 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 NRMQ8IXM6 262 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 BCORP1Q8N888 145 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 ZSCAN1Q8NBB4 408 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 C17orf47Q8NEP4 570 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 PTPMT1Q8WUK0 201 aaPredicted RBP14.95□□□□□ -0.02
CBX4-204ENST00000495122 EXTL1Q92935 676 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 RFKQ969G6 155 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 TMEM80Q96HE8 168 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 SENP5Q96HI0 755 aaPredicted RBP14.95□□□□□ -0.02
CBX4-204ENST00000495122 FAM46AQ96IP4 442 aaKnown RBP14.95□□□□□ -0.02
CBX4-204ENST00000495122 EXOSC3Q9NQT5 275 aaKnown RBP14.95□□□□□ -0.02
CBX4-204ENST00000495122 FBXO34Q9NWN3 711 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 GPR83Q9NYM4 423 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 AASSQ9UDR5 926 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 ZNF223Q9UK11 482 aaPredicted RBP14.95□□□□□ -0.02
CBX4-204ENST00000495122 BAIAP2Q9UQB8 552 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 MED31Q9Y3C7 131 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 CLCA3PQ9Y6N3 262 aa14.95□□□□□ -0.02
CBX4-204ENST00000495122 FER1L5A0AVI2 2057 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 SERINC4A6NH21 518 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 UNC119BA6NIH7 251 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 B8ZZF3 427 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 TO15178 435 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 PRODHO43272 600 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 RAD1O60671 282 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 ENTPD6O75354 484 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 RCBTB2O95199 551 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 NGFRP08138 427 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 SPTBP11277 2137 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 LIFP15018 202 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 GRK5P34947 590 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 PGDP52209 483 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 ERV3-1Q14264 604 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 SNAPC1Q16533 368 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 TIMM50Q3ZCQ8 353 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 ULK3Q6PHR2 472 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 KIF18BQ86Y91 864 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 NLGN4XQ8N0W4 816 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 METTL27Q8N6F8 245 aaPredicted RBP14.94□□□□□ -0.02
CBX4-204ENST00000495122 TCEANCQ8N8B7 351 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 OR2T33Q8NG76 320 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 OR52L1Q8NGH7 329 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 DNAJA4Q8WW22 397 aaPredicted RBP14.94□□□□□ -0.02
CBX4-204ENST00000495122 GPA33Q99795 319 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 ZNF426Q9BUY5 554 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 SPRY4Q9C004 299 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 FN3KQ9H479 309 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 CTPS2Q9NRF8 586 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 UBQLN4Q9NRR5 601 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 TBC1D23Q9NUY8 699 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 SIDT1Q9NXL6 827 aaKnown RBP14.94□□□□□ -0.02
CBX4-204ENST00000495122 TVP23BQ9NYZ1 205 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 SELENONQ9NZV5 590 aa14.94□□□□□ -0.02
CBX4-204ENST00000495122 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.94□□□□□ -0.024e-6■■■□□ 17.7
CBX4-204ENST00000495122 KDM4EB2RXH2 506 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 312.7 ms