RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	CLIP3	Q96DZ5	547 aa		12.44	□□□□□ -0.42
SUPT20H-222	ENST00000495071	AHCYL2	Q96HN2	611 aa	Known RBP	12.44	□□□□□ -0.42
SUPT20H-222	ENST00000495071	CFHR5	Q9BXR6	569 aa		12.44	□□□□□ -0.42
SUPT20H-222	ENST00000495071	THAP10	Q9P2Z0	257 aa	Predicted RBP	12.44	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ATXN8OS	P0DMR3	200 aa		12.44	□□□□□ -0.42
SUPT20H-222	ENST00000495071	PEPD	P12955	493 aa		12.44	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SSTR2	P30874	369 aa		12.44	□□□□□ -0.42
SUPT20H-222	ENST00000495071	GABRA3	P34903	492 aa		12.44	□□□□□ -0.42
SUPT20H-222	ENST00000495071	THBS2	P35442	1172 aa		12.44	□□□□□ -0.42
SUPT20H-222	ENST00000495071	FXYD6P3	P58550	94 aa		12.44	□□□□□ -0.42
SUPT20H-222	ENST00000495071	RPS15A	P62244	130 aa	Known RBP	12.44	□□□□□ -0.42
SUPT20H-222	ENST00000495071	EEF1A1	P68104	462 aa	Known RBP	12.44	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SMUG1	Q53HV7	270 aa		12.44	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ZBTB37	Q5TC79	503 aa		12.44	□□□□□ -0.42
SUPT20H-222	ENST00000495071	PRSS45	Q7RTY3	260 aa		12.44	□□□□□ -0.42
SUPT20H-222	ENST00000495071	PCNP	Q8WW12	178 aa	Known RBP	12.44	□□□□□ -0.42
SUPT20H-222	ENST00000495071	DPCD	Q9BVM2	203 aa	Predicted RBP	12.44	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SCN2A	Q99250	2005 aa		12.44	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ATG2B	Q96BY7	2078 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	DOCK9	Q9BZ29	2069 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071		J3QRE1	110 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	CPM	P14384	443 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	CXCL3	P19876	107 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SEC13	P55735	322 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	EXOSC7	Q15024	291 aa	Known RBP	12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	GAB4	Q2WGN9	574 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	RTL10	Q7L3V2	364 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	LINGO2	Q7L985	606 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	YAF2	Q8IY57	180 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ARL14	Q8N4G2	192 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ZNF433	Q8N7K0	673 aa	Predicted RBP	12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	OR52E2	Q8NGJ4	325 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	OR4K13	Q8NH42	304 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	RPLP0P6	Q8NHW5	317 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	THAP4	Q8WY91	577 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ERMAP	Q96PL5	475 aa	Predicted RBP	12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	TNFRSF13C	Q96RJ3	184 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	JAM3	Q9BX67	310 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SPACA6	W5XKT8	324 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ARL6IP5	O75915	188 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SERPINA3	P01011	423 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	THBS1	P07996	1170 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	NID1	P14543	1247 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	POU3F3	P20264	500 aa	Predicted RBP	12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	AK4	P27144	223 aa	Predicted RBP	12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	HOXD11	P31277	338 aa	Predicted RBP	12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	GBX2	P52951	348 aa	Predicted RBP	12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ZC3H14	Q6PJT7	736 aa	Known RBP	12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	GIMAP1	Q8WWP7	306 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	OR2M2	Q96R28	347 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	EMC7	Q9NPA0	242 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	B3GNT2	Q9NY97	397 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	GNG8	Q9UK08	70 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SATB2	Q9UPW6	733 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	URAD	A6NGE7	173 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071		I3L521	148 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	RNGTT	O60942	597 aa	Known RBP	12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	UBL3	O95164	117 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ZNF10	P21506	573 aa	Predicted RBP	12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	DNASE1	P24855	282 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	RPL4	P36578	427 aa	Known RBP	12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	MNX1	P50219	401 aa	Predicted RBP	12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	NRG3	P56975	720 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	RPS21	P63220	83 aa	Known RBP	12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ACTC1	P68032	377 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ACTA1	P68133	377 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	HTRA4	P83105	476 aa	Predicted RBP	12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SFRP4	Q6FHJ7	346 aa	Predicted RBP	12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ZNF425	Q6IV72	752 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	OR2L13	Q8N349	312 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SDR9C7	Q8NEX9	313 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	OR4D9	Q8NGE8	314 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	FGF13	Q92913	245 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	KISS1R	Q969F8	398 aa	Predicted RBP	12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SCMH1	Q96GD3	660 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	C10orf90	Q96M02	699 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	TRAF4	Q9BUZ4	470 aa	Predicted RBP	12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SLC17A9	Q9BYT1	436 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ERVMER34-1	Q9H9K5	563 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SIGLEC7	Q9Y286	467 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	HEBP2	Q9Y5Z4	205 aa		12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	NUP210	Q8TEM1	1887 aa	Predicted RBP	12.43	□□□□□ -0.42
SUPT20H-222	ENST00000495071	DNAJB6	O75190	326 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SLC22A5	O76082	557 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ATF1	P18846	271 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	NDUFS1	P28331	727 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	GDI2	P50395	445 aa	Known RBP	12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ARFIP1	P53367	373 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	PER3	P56645	1201 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SNRPN	P63162	240 aa	Known RBP	12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SHC2	P98077	582 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	FAAH2	Q6GMR7	532 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SIGIRR	Q6IA17	410 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ZNF782	Q6ZMW2	699 aa	Predicted RBP	12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ZNF680	Q8NEM1	530 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	PTCHD1	Q96NR3	888 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ASB16	Q96NS5	453 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	TIMP4	Q99727	224 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	GHITM	Q9H3K2	345 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ADGRL4	Q9HBW9	690 aa		12.42	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms