RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 H3BML4 177 aa15.43■□□□□ 0.06
SNX17-209ENST00000494893 C19orf84I3L1E1 186 aa15.43■□□□□ 0.06
SNX17-209ENST00000494893 ETV2O00321 342 aaPredicted RBP15.43■□□□□ 0.06
SNX17-209ENST00000494893 CLDN14O95500 239 aa15.43■□□□□ 0.06
SNX17-209ENST00000494893 CSTAP01040 98 aa15.43■□□□□ 0.06
SNX17-209ENST00000494893 UBTFL6P0CB48 400 aaPredicted RBP15.43■□□□□ 0.06
SNX17-209ENST00000494893 PEPDP12955 493 aa15.43■□□□□ 0.06
SNX17-209ENST00000494893 POU3F2P20265 443 aaPredicted RBP15.43■□□□□ 0.06
SNX17-209ENST00000494893 GZMMP51124 257 aa15.43■□□□□ 0.06
SNX17-209ENST00000494893 HPCAP84074 193 aa15.43■□□□□ 0.06
SNX17-209ENST00000494893 FADDQ13158 208 aa15.43■□□□□ 0.06
SNX17-209ENST00000494893 EIF3MQ7L2H7 374 aaKnown RBP15.43■□□□□ 0.06
SNX17-209ENST00000494893 CALHM3Q86XJ0 350 aa15.43■□□□□ 0.06
SNX17-209ENST00000494893 LACC1Q8IV20 430 aa15.43■□□□□ 0.06
SNX17-209ENST00000494893 UBQLNLQ8IYU4 475 aa15.43■□□□□ 0.06
SNX17-209ENST00000494893 C9orf106Q8NAJ2 232 aa15.43■□□□□ 0.06
SNX17-209ENST00000494893 OR5W2Q8NH69 310 aa15.43■□□□□ 0.06
SNX17-209ENST00000494893 OR10A6Q8NH74 314 aa15.43■□□□□ 0.06
SNX17-209ENST00000494893 MBD3L2Q8NHZ7 208 aaPredicted RBP15.43■□□□□ 0.06
SNX17-209ENST00000494893 CNOT9Q92600 299 aaKnown RBP15.43■□□□□ 0.06
SNX17-209ENST00000494893 ZBTB8AQ96BR9 441 aa15.43■□□□□ 0.06
SNX17-209ENST00000494893 ZNF583Q96ND8 569 aa15.43■□□□□ 0.06
SNX17-209ENST00000494893 UCN2Q96RP3 112 aa15.43■□□□□ 0.06
SNX17-209ENST00000494893 ALG2Q9H553 416 aa15.43■□□□□ 0.06
SNX17-209ENST00000494893 MTHFD2LQ9H903 347 aaPredicted RBP15.43■□□□□ 0.06
SNX17-209ENST00000494893 A4GALTQ9NPC4 353 aa15.43■□□□□ 0.06
SNX17-209ENST00000494893 CHST2Q9Y4C5 530 aa15.43■□□□□ 0.06
SNX17-209ENST00000494893 LINC01387J3KSC0 135 aa15.42■□□□□ 0.06
SNX17-209ENST00000494893 SEC14L5O43304 696 aa15.42■□□□□ 0.06
SNX17-209ENST00000494893 PRKCAP17252 672 aa15.42■□□□□ 0.06
SNX17-209ENST00000494893 SHC1P29353 583 aa15.42■□□□□ 0.06
SNX17-209ENST00000494893 CHRNB4P30926 498 aa15.42■□□□□ 0.06
SNX17-209ENST00000494893 ZNF41P51814 821 aaPredicted RBP15.42■□□□□ 0.06
SNX17-209ENST00000494893 KCNJ10P78508 379 aa15.42■□□□□ 0.06
SNX17-209ENST00000494893 ADRM1Q16186 407 aa15.42■□□□□ 0.06
SNX17-209ENST00000494893 CTU2Q2VPK5 515 aaKnown RBP15.42■□□□□ 0.06
SNX17-209ENST00000494893 SLC25A53Q5H9E4 307 aa15.42■□□□□ 0.06
SNX17-209ENST00000494893 SERPINA11Q86U17 422 aa15.42■□□□□ 0.06
SNX17-209ENST00000494893 VRK2Q86Y07 508 aa15.42■□□□□ 0.06
SNX17-209ENST00000494893 TMCO5AQ8N6Q1 288 aa15.42■□□□□ 0.06
SNX17-209ENST00000494893 FAM156AQ8NDB6 213 aa15.42■□□□□ 0.06
SNX17-209ENST00000494893 TOR1AIP2Q8NFQ8 470 aa15.42■□□□□ 0.06
SNX17-209ENST00000494893 OR10Q1Q8NGQ4 319 aa15.42■□□□□ 0.06
SNX17-209ENST00000494893 LILRB4Q8NHJ6 448 aa15.42■□□□□ 0.06
SNX17-209ENST00000494893 SMPDL3BQ92485 455 aa15.42■□□□□ 0.06
SNX17-209ENST00000494893 ADGRG7Q96K78 797 aa15.42■□□□□ 0.06
SNX17-209ENST00000494893 TREX2Q9BQ50 279 aaPredicted RBP15.42■□□□□ 0.06
SNX17-209ENST00000494893 UCK2Q9BZX2 261 aa15.42■□□□□ 0.06
SNX17-209ENST00000494893 CALHM2Q9HA72 323 aa15.42■□□□□ 0.06
SNX17-209ENST00000494893 GMPR2Q9P2T1 348 aaKnown RBP15.42■□□□□ 0.06
SNX17-209ENST00000494893 RRP15Q9Y3B9 282 aaKnown RBP15.42■□□□□ 0.06
SNX17-209ENST00000494893 KLF2Q9Y5W3 355 aaPredicted RBP15.42■□□□□ 0.06
SNX17-209ENST00000494893 AP4B1Q9Y6B7 739 aa15.42■□□□□ 0.06
SNX17-209ENST00000494893 NBPF19A0A087WUL8 3843 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 FAM220BPB1ANY3 271 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 PRSS44E7EML9 344 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 CIB2O75838 187 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 CYP7B1O75881 506 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 NUDT14O95848 222 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 TGM6O95932 706 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 OPN1LWP04000 364 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 ARAFP10398 606 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 HTR1EP28566 365 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 TIMP3P35625 211 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 CCR4P51679 360 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 ZNF136P52737 540 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 CRISP3P54108 245 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 TFF3Q07654 80 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 TRIM25Q14258 630 aaKnown RBP15.41■□□□□ 0.06
SNX17-209ENST00000494893 QPRTQ15274 297 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 NET1Q7Z628 596 aaPredicted RBP15.41■□□□□ 0.06
SNX17-209ENST00000494893 WDR60Q8WVS4 1066 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 ASB5Q8WWX0 329 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 PMM1Q92871 262 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 ZNF845Q96IR2 970 aaPredicted RBP15.41■□□□□ 0.06
SNX17-209ENST00000494893 KCTD14Q9BQ13 255 aaPredicted RBP15.41■□□□□ 0.06
SNX17-209ENST00000494893 SPATA9Q9BWV2 254 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 TMEM185BQ9H7F4 350 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 BCL2L10Q9HD36 194 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.41■□□□□ 0.06
SNX17-209ENST00000494893 THUMPD1Q9NXG2 353 aaKnown RBP15.41■□□□□ 0.06
SNX17-209ENST00000494893 DNAJB12Q9NXW2 375 aaKnown RBP15.41■□□□□ 0.06
SNX17-209ENST00000494893 COQ3Q9NZJ6 369 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 POMPQ9Y244 141 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 SLC35A3Q9Y2D2 325 aa15.41■□□□□ 0.06
SNX17-209ENST00000494893 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.4■□□□□ 0.06
SNX17-209ENST00000494893 A0A0J9YW62 118 aa15.4■□□□□ 0.06
SNX17-209ENST00000494893 NKX2-6A6NCS4 301 aa15.4■□□□□ 0.06
SNX17-209ENST00000494893 FAM90A27PA6NNH2 459 aa15.4■□□□□ 0.06
SNX17-209ENST00000494893 AP3D1O14617 1153 aa15.4■□□□□ 0.06
SNX17-209ENST00000494893 DBIP07108 87 aaKnown RBP15.4■□□□□ 0.06
SNX17-209ENST00000494893 NID1P14543 1247 aa15.4■□□□□ 0.06
SNX17-209ENST00000494893 TCN1P20061 433 aaPredicted RBP15.4■□□□□ 0.06
SNX17-209ENST00000494893 MSX2P35548 267 aaPredicted RBP15.4■□□□□ 0.06
SNX17-209ENST00000494893 DLX5P56178 289 aa15.4■□□□□ 0.06
SNX17-209ENST00000494893 TRAP1Q12931 704 aaKnown RBP15.4■□□□□ 0.06
SNX17-209ENST00000494893 BNIP2Q12982 314 aa15.4■□□□□ 0.06
SNX17-209ENST00000494893 FXNQ16595 210 aa15.4■□□□□ 0.06
SNX17-209ENST00000494893 MRPL2Q5T653 305 aaKnown RBP15.4■□□□□ 0.06
SNX17-209ENST00000494893 ZNF836Q6ZNA1 936 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms