RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 REM1O75628 298 aa15.15■□□□□ 0.02
ATG4B-225ENST00000494465 BCL10O95999 233 aa15.15■□□□□ 0.02
ATG4B-225ENST00000494465 SAGP10523 405 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-225ENST00000494465 HPGDP15428 266 aa15.15■□□□□ 0.02
ATG4B-225ENST00000494465 LCN1P31025 176 aa15.15■□□□□ 0.02
ATG4B-225ENST00000494465 HLA-DQA1Q5Y7H0 255 aa15.15■□□□□ 0.02
ATG4B-225ENST00000494465 LNX2Q8N448 690 aa15.15■□□□□ 0.02
ATG4B-225ENST00000494465 APCDD1LQ8NCL9 501 aa15.15■□□□□ 0.02
ATG4B-225ENST00000494465 C17orf47Q8NEP4 570 aa15.15■□□□□ 0.02
ATG4B-225ENST00000494465 TBC1D15Q8TC07 691 aa15.15■□□□□ 0.02
ATG4B-225ENST00000494465 CFAP54Q96N23 3096 aa15.15■□□□□ 0.02
ATG4B-225ENST00000494465 RPS6KB2Q9UBS0 482 aa15.15■□□□□ 0.02
ATG4B-225ENST00000494465 DIMT1Q9UNQ2 313 aaKnown RBP15.15■□□□□ 0.02
ATG4B-225ENST00000494465 CARD8Q9Y2G2 431 aa15.15■□□□□ 0.02
ATG4B-225ENST00000494465 ALOX12BO75342 701 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 RCBTB2O95199 551 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 HMGN1P05114 100 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 HEXBP07686 556 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 HBQ1P09105 142 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 ABCD3P28288 659 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 GRK5P34947 590 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 MPLP40238 635 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 NCS1P62166 190 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 CRYZQ08257 329 aaKnown RBP15.14■□□□□ 0.01
ATG4B-225ENST00000494465 MED22Q15528 200 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 SMARCD3Q6STE5 483 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 PAQR6Q6TCH4 344 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 CYP4Z2PQ8N1L4 340 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 NDNFQ8TB73 568 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 DNAJA4Q8WW22 397 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-225ENST00000494465 ATOH1Q92858 354 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-225ENST00000494465 SPSB2Q99619 263 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 MGLLQ99685 303 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 AKIRIN1Q9H9L7 192 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-225ENST00000494465 ICAM5Q9UMF0 924 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 GNB5O14775 395 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 ZNF264O43296 627 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 GADD45AP24522 165 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 MST1P26927 711 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 RGS6P49758 472 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 LIMK1P53667 647 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 IL11RAQ14626 422 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 RPL13AP3Q6NVV1 102 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 C19orf48Q6RUI8 117 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 DBX2Q6ZNG2 339 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 SLC34A3Q8N130 599 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 NANOGP1Q8N7R0 232 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 BBS1Q8NFJ9 593 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 OMA1Q96E52 524 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 HSPBAP1Q96EW2 488 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 RNFT2Q96EX2 444 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 WDR77Q9BQA1 342 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-225ENST00000494465 TEX12Q9BXU0 123 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 ARRDC1-AS1Q9H2J1 176 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 FGF20Q9NP95 211 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-225ENST00000494465 HINT3Q9NQE9 182 aaKnown RBP15.14■□□□□ 0.01
ATG4B-225ENST00000494465 PPIEQ9UNP9 301 aaKnown RBP15.14■□□□□ 0.01
ATG4B-225ENST00000494465 PCNX3Q9H6A9 2034 aa15.14■□□□□ 0.01
ATG4B-225ENST00000494465 SAGE2PA6NJ88 616 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 CSO75390 466 aaKnown RBP15.13■□□□□ 0.01
ATG4B-225ENST00000494465 RAB36O95755 333 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 HSMCR30P0CW71 290 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 BMP7P18075 431 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 IL12BP29460 328 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 TGFBR1P36897 503 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 MTNR1AP48039 350 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 COPZ1P61923 177 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 RNF4P78317 190 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 PLCXD2Q0VAA5 305 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 RAB40BQ12829 278 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 DYNC1I2Q13409 638 aaKnown RBP15.13■□□□□ 0.01
ATG4B-225ENST00000494465 TRA2AQ13595 282 aaKnown RBP eCLIP15.13■□□□□ 0.01
ATG4B-225ENST00000494465 ANGPT1Q15389 498 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 BPHLQ86WA6 291 aaPredicted RBP15.13■□□□□ 0.01
ATG4B-225ENST00000494465 OR52L1Q8NGH7 329 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 OR51A7Q8NH64 312 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 OPALINQ96PE5 141 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 TAPBPLQ9BX59 468 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 SLC26A1Q9H2B4 701 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 MCCC2Q9HCC0 563 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 KIF26BQ2KJY2 2108 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 IGKV1D-42A0A075B6H8 117 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 MEN1O00255 615 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 HCN1O60741 890 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 APOL3O95236 402 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 ZNF28P17035 718 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 ETV5P41161 510 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 ETV1P50549 477 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 KLHL22Q53GT1 634 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 WBP2NLQ6ICG8 309 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 PROKR2Q8NFJ6 384 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 PLEKHA8Q96JA3 519 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 TNFRSF13CQ96RJ3 184 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 ERGIC3Q9Y282 383 aa15.13■□□□□ 0.01
ATG4B-225ENST00000494465 C17orf51A8MQB3 221 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 ZNF883P0CG24 379 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 PNLIPRP2P54317 469 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 EMP2P54851 167 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 CDH11P55287 796 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 SSX1Q16384 188 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms