RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 PDE7AQ13946 482 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 VPS26BQ4G0F5 336 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 ATP6AP1LQ52LC2 224 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 C6orf136Q5SQH8 315 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 CRYBG3Q68DQ2 2970 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 PLXDC2Q6UX71 529 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 LRIG3Q6UXM1 1119 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 GALNT10Q86SR1 603 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 TMEM200AQ86VY9 491 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 MREGQ8N565 214 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 FADS6Q8N9I5 356 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 CDRT4Q8N9R6 151 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 C9orf106Q8NAJ2 232 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 SLC16A11Q8NCK7 471 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 OR2M3Q8NG83 312 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 OR7A2PQ8NGA2 310 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 ST8SIA2Q92186 375 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 ZBTB9Q96C00 473 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 INTS12Q96CB8 462 aaKnown RBP7.29□□□□□ -1.24
RIF1-211ENST00000494333 MTERF3Q96E29 417 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 RMND5BQ96G75 393 aaPredicted RBP7.29□□□□□ -1.24
RIF1-211ENST00000494333 C16orf58Q96GQ5 468 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 C1orf50Q9BV19 199 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 TBL1XR1Q9BZK7 514 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 CENPHQ9H3R5 247 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 PTGES2Q9H7Z7 377 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 ACSS1Q9NUB1 689 aaPredicted RBP7.29□□□□□ -1.24
RIF1-211ENST00000494333 FAM120CQ9NX05 1096 aaKnown RBP7.29□□□□□ -1.24
RIF1-211ENST00000494333 ABCG2Q9UNQ0 655 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 L3MBTL1Q9Y468 752 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 CENPEQ02224 2701 aa7.29□□□□□ -1.24
RIF1-211ENST00000494333 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 A0A1W2PRB8 838 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 SCAMP2O15127 329 aaKnown RBP7.28□□□□□ -1.24
RIF1-211ENST00000494333 EMC8O43402 210 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 ITM2AO43736 263 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 GMFGO60234 142 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 LYPLA1O75608 230 aaPredicted RBP7.28□□□□□ -1.24
RIF1-211ENST00000494333 RCBTB2O95199 551 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 UTS2O95399 124 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 HSPA4LO95757 839 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 ANGPTL1O95841 491 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 ALOX5P09917 674 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 TMIGD3P0DMS9 266 aaPredicted RBP7.28□□□□□ -1.24
RIF1-211ENST00000494333 LAMP1P11279 417 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 PEPDP12955 493 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 ZNF708P17019 499 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 DDX5P17844 614 aaKnown RBP7.28□□□□□ -1.24
RIF1-211ENST00000494333 RPL3P39023 403 aaKnown RBP7.28□□□□□ -1.24
RIF1-211ENST00000494333 PEX19P40855 299 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 MAP3K8P41279 467 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 CLDN18P56856 261 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 B3GALT5-AS1P59052 145 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 ZNF844Q08AG5 666 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 PTGR1Q14914 329 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 MLC1Q15049 377 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 BCL2A1Q16548 175 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 GRAMD1BQ3KR37 738 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 XKR7Q5GH72 579 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 CPTPQ5TA50 214 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 IL23RQ5VWK5 629 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 RAET1LQ5VY80 246 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 APOOLQ6UXV4 268 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 CHMP1BQ7LBR1 199 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 UBQLNLQ8IYU4 475 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 FNDC5Q8NAU1 212 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 OR5M1Q8NGP8 315 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 OR6Y1Q8NGX8 325 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 OR4C3Q8NH37 302 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 FBXO30Q8TB52 745 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 RNASE6Q93091 150 aaKnown RBP7.28□□□□□ -1.24
RIF1-211ENST00000494333 TUBGCP3Q96CW5 907 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 FAM120BQ96EK7 910 aaKnown RBP7.28□□□□□ -1.24
RIF1-211ENST00000494333 GIMAP5Q96F15 307 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 CHMP6Q96FZ7 201 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 PKNOX2Q96KN3 472 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 PRPF18Q99633 342 aaKnown RBP7.28□□□□□ -1.24
RIF1-211ENST00000494333 SH3GL2Q99962 352 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 CPPED1Q9BRF8 314 aaPredicted RBP7.28□□□□□ -1.24
RIF1-211ENST00000494333 ATP6V1HQ9UI12 483 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 ZNF337Q9Y3M9 751 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 SNX8Q9Y5X2 465 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 NCKAP5O14513 1909 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 CACNA1CQ13936 2221 aa7.28□□□□□ -1.24
RIF1-211ENST00000494333 PHF3Q92576 2039 aaKnown RBP7.27□□□□□ -1.25
RIF1-211ENST00000494333 TUBAL3A6NHL2 446 aa7.27□□□□□ -1.25
RIF1-211ENST00000494333 CCDC154A6NI56 674 aa7.27□□□□□ -1.25
RIF1-211ENST00000494333 EEF1E1-BLOC1S5C9J1V9 151 aa7.27□□□□□ -1.25
RIF1-211ENST00000494333 H0YC42 278 aa7.27□□□□□ -1.25
RIF1-211ENST00000494333 H3BML4 177 aa7.27□□□□□ -1.25
RIF1-211ENST00000494333 EEF1E1O43324 174 aaKnown RBP7.27□□□□□ -1.25
RIF1-211ENST00000494333 CTAG2O75638 210 aa7.27□□□□□ -1.25
RIF1-211ENST00000494333 KCNK2O95069 426 aa7.27□□□□□ -1.25
RIF1-211ENST00000494333 TGM6O95932 706 aa7.27□□□□□ -1.25
RIF1-211ENST00000494333 HMGN2P05204 90 aaKnown RBP7.27□□□□□ -1.25
RIF1-211ENST00000494333 ACP2P11117 423 aa7.27□□□□□ -1.25
RIF1-211ENST00000494333 G6PDP11413 515 aa7.27□□□□□ -1.25
RIF1-211ENST00000494333 HPGDP15428 266 aa7.27□□□□□ -1.25
RIF1-211ENST00000494333 PRPS1L1P21108 318 aa7.27□□□□□ -1.25
RIF1-211ENST00000494333 TBXA2RP21731 343 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms