RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 PLEK2Q9NYT0 353 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 VDAC3Q9Y277 283 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 NPIPA5A0A0B4J1W7 369 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 HHLA1C9JL84 531 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 NPIPA7E9PJI5 369 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 GFRA2O00451 464 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 NPIPA8P0DM63 369 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 HOXC5Q00444 222 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 ZNF91Q05481 1191 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 BCL2A1Q16548 175 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 VRK2Q86Y07 508 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 KHSRPQ92945 711 aaKnown RBP eCLIP17.92■□□□□ 0.46
COL27A1-207ENST00000494090 NSG1A0A0A6YYJ2 146 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 RAB3DO95716 219 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 MPIG6BO95866 241 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 CPMP14384 443 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 TACR1P25103 407 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 CAMK2DQ13557 499 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 HSF5Q4G112 596 aaPredicted RBP17.92■□□□□ 0.46
COL27A1-207ENST00000494090 AGAP6Q5VW22 663 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 C5orf46Q6UWT4 87 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 OR14A16Q8NHC5 309 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 AGAP4Q96P64 663 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 NWD2Q9ULI1 1742 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 OR8U9P0C7N5 309 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 PRDX1Q06830 199 aaKnown RBP17.91■□□□□ 0.46
COL27A1-207ENST00000494090 SLC16A9Q7RTY1 509 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 LRRC28Q86X40 367 aaPredicted RBP17.91■□□□□ 0.46
COL27A1-207ENST00000494090 LILRB2Q8N423 598 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 OR5D14Q8NGL3 314 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 C4orf36Q96KX1 117 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 PAPOLGQ9BWT3 736 aaKnown RBP17.91■□□□□ 0.46
COL27A1-207ENST00000494090 SAGE1Q9NXZ1 904 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 LRIT1Q9P2V4 623 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 HS3ST2Q9Y278 367 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 A0A1W2PQ09 198 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 UBFD1O14562 309 aaKnown RBP17.91■□□□□ 0.46
COL27A1-207ENST00000494090 ADAM12O43184 909 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 GDF1P27539 372 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 CAMLGP49069 296 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 VASPP50552 380 aaPredicted RBP17.91■□□□□ 0.46
COL27A1-207ENST00000494090 KIAA1211LQ6NV74 962 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 LKAAEAR1Q8TD35 194 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 NT5DC2Q9H857 520 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 OLAHQ9NV23 265 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 DNAJB11Q9UBS4 358 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 TESQ9UGI8 421 aaKnown RBP17.91■□□□□ 0.46
COL27A1-207ENST00000494090 RPH3AQ9Y2J0 694 aaPredicted RBP17.91■□□□□ 0.46
COL27A1-207ENST00000494090 YKT6O15498 198 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 LDB3O75112 727 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 GPR50Q13585 617 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 CFAP77Q6ZQR2 320 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 MFSD9Q8NBP5 474 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 CUEDC1Q9NWM3 386 aaPredicted RBP17.91■□□□□ 0.46
COL27A1-207ENST00000494090 IL37Q9NZH6 218 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 F5H5K5 113 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 AKAIN1P0CW23 69 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 TSPAN31Q12999 210 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 NIPAL3Q6P499 406 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 PRR22Q8IZ63 422 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 GTPBP8Q8N3Z3 284 aaPredicted RBP17.91■□□□□ 0.46
COL27A1-207ENST00000494090 OR5K2Q8NHB8 316 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 SYNPRQ8TBG9 265 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 RNF128Q8TEB7 428 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 SULT4A1Q9BR01 284 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 CHD4Q14839 1912 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 TP53P04637 393 aaPredicted RBP17.91■□□□□ 0.46
COL27A1-207ENST00000494090 TPRA1Q86W33 373 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 ZNF695Q8IW36 515 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 OR13F1Q8NGS4 319 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 CD300AQ9UGN4 299 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 HHLA2Q9UM44 414 aa17.91■□□□□ 0.46
COL27A1-207ENST00000494090 ZNF14P17017 642 aaPredicted RBP17.9■□□□□ 0.46
COL27A1-207ENST00000494090 ERVK-25P63136 954 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 ZNF616Q08AN1 781 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 OR1Q1Q15612 314 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 AKR1C8PQ5T2L2 129 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 PM20D2Q8IYS1 436 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 WDSUB1Q8N9V3 476 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 AGBL5Q8NDL9 886 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 ASB17Q8WXJ9 295 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 PLEKHJ1Q9NW61 149 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 RASD1Q9Y272 281 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 HCFC2Q9Y5Z7 792 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 D6RAR5 112 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 IFNA10P01566 189 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 IFNA4P05014 189 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 CD46P15529 392 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 PSMB5P28074 263 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 HOXA9P31269 272 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 MEF2DQ14814 521 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 CYP4V2Q6ZWL3 525 aaPredicted RBP17.9■□□□□ 0.46
COL27A1-207ENST00000494090 ELMOD3Q96FG2 381 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 RTP3Q9BQQ7 232 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 TAAR2Q9P1P5 351 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 V9GY05 133 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 GASTP01350 101 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 SERPINE2P07093 398 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 GJA4P35212 333 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 PLGLAQ15195 96 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms