RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 CBFBQ13951 182 aa10.48□□□□□ -0.73
UBA3-211ENST00000493957 CYLC2Q14093 348 aaPredicted RBP10.48□□□□□ -0.73
UBA3-211ENST00000493957 SCARB2Q14108 478 aa10.48□□□□□ -0.73
UBA3-211ENST00000493957 BCL2A1Q16548 175 aa10.48□□□□□ -0.73
UBA3-211ENST00000493957 GLIPR1L2Q4G1C9 344 aa10.48□□□□□ -0.73
UBA3-211ENST00000493957 RIPPLY2Q5TAB7 128 aa10.48□□□□□ -0.73
UBA3-211ENST00000493957 POMZP3Q6PJE2 187 aa10.48□□□□□ -0.73
UBA3-211ENST00000493957 XKRXQ6PP77 449 aa10.48□□□□□ -0.73
UBA3-211ENST00000493957 CPLX4Q7Z7G2 160 aa10.48□□□□□ -0.73
UBA3-211ENST00000493957 LACC1Q8IV20 430 aa10.48□□□□□ -0.73
UBA3-211ENST00000493957 PEX5LQ8IYB4 626 aa10.48□□□□□ -0.73
UBA3-211ENST00000493957 ZZZ3Q8IYH5 903 aa10.48□□□□□ -0.73
UBA3-211ENST00000493957 GCNT2Q8N0V5 402 aa10.48□□□□□ -0.73
UBA3-211ENST00000493957 RELL2Q8NC24 303 aaPredicted RBP10.48□□□□□ -0.73
UBA3-211ENST00000493957 FIG4Q92562 907 aa10.48□□□□□ -0.73
UBA3-211ENST00000493957 LRRC58Q96CX6 371 aa10.48□□□□□ -0.73
UBA3-211ENST00000493957 ADGRG7Q96K78 797 aa10.48□□□□□ -0.73
UBA3-211ENST00000493957 PINK1Q9BXM7 581 aa10.48□□□□□ -0.73
UBA3-211ENST00000493957 NSRP1Q9H0G5 558 aaKnown RBP10.48□□□□□ -0.73
UBA3-211ENST00000493957 MYLK2Q9H1R3 596 aa10.48□□□□□ -0.73
UBA3-211ENST00000493957 CALML5Q9NZT1 146 aa10.48□□□□□ -0.73
UBA3-211ENST00000493957 AP4B1Q9Y6B7 739 aa10.48□□□□□ -0.73
UBA3-211ENST00000493957 ADGRG4Q8IZF6 3080 aa10.48□□□□□ -0.73
UBA3-211ENST00000493957 PRR14LQ5THK1 2151 aa10.48□□□□□ -0.73
UBA3-211ENST00000493957 A0A0G2JPF8 293 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 CDHR4A6H8M9 788 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 MBD3L4A6NDZ8 208 aaPredicted RBP10.47□□□□□ -0.73
UBA3-211ENST00000493957 MBD3L3A6NE82 208 aaPredicted RBP10.47□□□□□ -0.73
UBA3-211ENST00000493957 MBD3L5A6NJ08 208 aaPredicted RBP10.47□□□□□ -0.73
UBA3-211ENST00000493957 BBIP1A8MTZ0 92 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 HNRNPCL2B2RXH8 293 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 HNRNPCL3B7ZW38 293 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 ETV2O00321 342 aaPredicted RBP10.47□□□□□ -0.73
UBA3-211ENST00000493957 TNFSF11O14788 317 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 TPST1O60507 370 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 HNRNPCL1O60812 293 aaKnown RBP10.47□□□□□ -0.73
UBA3-211ENST00000493957 GCM2O75603 506 aaPredicted RBP10.47□□□□□ -0.73
UBA3-211ENST00000493957 CLDN14O95500 239 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 HOXD4P09016 255 aaPredicted RBP10.47□□□□□ -0.73
UBA3-211ENST00000493957 HNRNPCL4P0DMR1 293 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 COX4I1P13073 169 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 AGAP20933 346 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 HTR1EP28566 365 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 ADSLP30566 484 aaPredicted RBP10.47□□□□□ -0.73
UBA3-211ENST00000493957 CHRNB4P30926 498 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 CEACAM8P31997 349 aaPredicted RBP10.47□□□□□ -0.73
UBA3-211ENST00000493957 SLC6A8P48029 635 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 HOXC5Q00444 222 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 MAPRE2Q15555 327 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 CYP51A1Q16850 503 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 MMEL1Q495T6 779 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 LIN52Q52LA3 116 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 SLC25A53Q5H9E4 307 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 NANOGP8Q6NSW7 305 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 REEP3Q6NUK4 255 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 PLEKHM3Q6ZWE6 761 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 NET1Q7Z628 596 aaPredicted RBP10.47□□□□□ -0.73
UBA3-211ENST00000493957 GRAMD2AQ8IUY3 354 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 MEIOBQ8N635 442 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 METTL25Q8N6Q8 603 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 OR10A6Q8NH74 314 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 MBD3L2Q8NHZ7 208 aaPredicted RBP10.47□□□□□ -0.73
UBA3-211ENST00000493957 BBS10Q8TAM1 723 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 FNDC9Q8TBE3 224 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 OIT3Q8WWZ8 545 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 DNAJA3Q96EY1 480 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 TMEM38AQ9H6F2 299 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 KAT8Q9H7Z6 458 aaKnown RBP10.47□□□□□ -0.73
UBA3-211ENST00000493957 NANOGQ9H9S0 305 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 CALHM2Q9HA72 323 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 HHATLQ9HCP6 504 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 BCL2L10Q9HD36 194 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 EXOSC3Q9NQT5 275 aaKnown RBP10.47□□□□□ -0.73
UBA3-211ENST00000493957 CTPS2Q9NRF8 586 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 ACER3Q9NUN7 267 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 THUMPD1Q9NXG2 353 aaKnown RBP10.47□□□□□ -0.73
UBA3-211ENST00000493957 COQ3Q9NZJ6 369 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 CORO2BQ9UQ03 480 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 GPC6Q9Y625 555 aaPredicted RBP10.47□□□□□ -0.73
UBA3-211ENST00000493957 NBPF19A0A087WUL8 3843 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 CELSR2Q9HCU4 2923 aa10.47□□□□□ -0.73
UBA3-211ENST00000493957 A0A1W2PNR3 127 aa10.46□□□□□ -0.73
UBA3-211ENST00000493957 TMEM247A6NEH6 219 aa10.46□□□□□ -0.73
UBA3-211ENST00000493957 C5orf58C9J3I9 102 aa10.46□□□□□ -0.73
UBA3-211ENST00000493957 LINC01387J3KSC0 135 aa10.46□□□□□ -0.73
UBA3-211ENST00000493957 SLC22A2O15244 555 aa10.46□□□□□ -0.73
UBA3-211ENST00000493957 CXCL13O43927 109 aa10.46□□□□□ -0.73
UBA3-211ENST00000493957 CCDC22O60826 627 aa10.46□□□□□ -0.73
UBA3-211ENST00000493957 AQP8O94778 261 aa10.46□□□□□ -0.73
UBA3-211ENST00000493957 OPN1SWP03999 348 aa10.46□□□□□ -0.73
UBA3-211ENST00000493957 THBS1P07996 1170 aa10.46□□□□□ -0.73
UBA3-211ENST00000493957 PABPC4LP0CB38 370 aaKnown RBP10.46□□□□□ -0.73
UBA3-211ENST00000493957 GP1BBP13224 206 aa10.46□□□□□ -0.73
UBA3-211ENST00000493957 PGCP20142 388 aa10.46□□□□□ -0.73
UBA3-211ENST00000493957 KLK2P20151 261 aa10.46□□□□□ -0.73
UBA3-211ENST00000493957 TIMP3P35625 211 aa10.46□□□□□ -0.73
UBA3-211ENST00000493957 EIF1P41567 113 aaKnown RBP10.46□□□□□ -0.73
UBA3-211ENST00000493957 ACAA2P42765 397 aaKnown RBP10.46□□□□□ -0.73
UBA3-211ENST00000493957 EIF1AXP47813 144 aaKnown RBP10.46□□□□□ -0.73
UBA3-211ENST00000493957 IDH2P48735 452 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms