RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 ZZZ3Q8IYH5 903 aa20.27■□□□□ 0.84
SNIP1-203ENST00000493916 ARFGAP2Q8N6H7 521 aa20.27■□□□□ 0.84
SNIP1-203ENST00000493916 WDR60Q8WVS4 1066 aa20.27■□□□□ 0.84
SNIP1-203ENST00000493916 OSTF1Q92882 214 aa20.27■□□□□ 0.84
SNIP1-203ENST00000493916 CPNE4Q96A23 557 aaPredicted RBP20.27■□□□□ 0.84
SNIP1-203ENST00000493916 GMPPAQ96IJ6 420 aaPredicted RBP20.27■□□□□ 0.84
SNIP1-203ENST00000493916 RAD21L1Q9H4I0 556 aa20.27■□□□□ 0.84
SNIP1-203ENST00000493916 RABEP2Q9H5N1 569 aa20.27■□□□□ 0.84
SNIP1-203ENST00000493916 NPHS2Q9NP85 383 aa20.27■□□□□ 0.84
SNIP1-203ENST00000493916 GLRX2Q9NS18 164 aa20.27■□□□□ 0.84
SNIP1-203ENST00000493916 OTOGQ6ZRI0 2925 aa20.26■□□□□ 0.83
SNIP1-203ENST00000493916 CLDN24A6NM45 220 aa20.26■□□□□ 0.83
SNIP1-203ENST00000493916 SS18L1O75177 396 aaPredicted RBP20.26■□□□□ 0.83
SNIP1-203ENST00000493916 CGAP01215 116 aa20.26■□□□□ 0.83
SNIP1-203ENST00000493916 TFPTP0C1Z6 253 aa20.26■□□□□ 0.83
SNIP1-203ENST00000493916 CD8BP10966 210 aa20.26■□□□□ 0.83
SNIP1-203ENST00000493916 CRISP3P54108 245 aa20.26■□□□□ 0.83
SNIP1-203ENST00000493916 SIRPAP78324 504 aa20.26■□□□□ 0.83
SNIP1-203ENST00000493916 FADDQ13158 208 aa20.26■□□□□ 0.83
SNIP1-203ENST00000493916 ZNF239Q16600 458 aaKnown RBP20.26■□□□□ 0.83
SNIP1-203ENST00000493916 TMEM176BQ3YBM2 270 aaPredicted RBP20.26■□□□□ 0.83
SNIP1-203ENST00000493916 AGKQ53H12 422 aa20.26■□□□□ 0.83
SNIP1-203ENST00000493916 PPP4R4Q6NUP7 873 aa20.26■□□□□ 0.83
SNIP1-203ENST00000493916 SLC38A5Q8WUX1 472 aa20.26■□□□□ 0.83
SNIP1-203ENST00000493916 THOC1Q96FV9 657 aaKnown RBP20.26■□□□□ 0.83
SNIP1-203ENST00000493916 ZNF385DQ9H6B1 395 aa20.26■□□□□ 0.83
SNIP1-203ENST00000493916 COQ10BQ9H8M1 238 aa20.26■□□□□ 0.83
SNIP1-203ENST00000493916 DNAJB12Q9NXW2 375 aaKnown RBP20.26■□□□□ 0.83
SNIP1-203ENST00000493916 DCTN4Q9UJW0 460 aa20.26■□□□□ 0.83
SNIP1-203ENST00000493916 TRIM33Q9UPN9 1127 aa20.26■□□□□ 0.83
SNIP1-203ENST00000493916 GMEB1Q9Y692 573 aa20.26■□□□□ 0.83
SNIP1-203ENST00000493916 TUBAL3A6NHL2 446 aa20.25■□□□□ 0.83
SNIP1-203ENST00000493916 CLIC1O00299 241 aa20.25■□□□□ 0.83
SNIP1-203ENST00000493916 SMNDC1O75940 238 aaKnown RBP eCLIP20.25■□□□□ 0.83
SNIP1-203ENST00000493916 BCHEP06276 602 aa20.25■□□□□ 0.83
SNIP1-203ENST00000493916 BMP2P12643 396 aa20.25■□□□□ 0.83
SNIP1-203ENST00000493916 RGNQ15493 299 aa20.25■□□□□ 0.83
SNIP1-203ENST00000493916 PLEKHM3Q6ZWE6 761 aa20.25■□□□□ 0.83
SNIP1-203ENST00000493916 MSRB3Q8IXL7 192 aa20.25■□□□□ 0.83
SNIP1-203ENST00000493916 PEX5LQ8IYB4 626 aa20.25■□□□□ 0.83
SNIP1-203ENST00000493916 OR6K3Q8NGY3 331 aa20.25■□□□□ 0.83
SNIP1-203ENST00000493916 RNF128Q8TEB7 428 aa20.25■□□□□ 0.83
SNIP1-203ENST00000493916 CNOT9Q92600 299 aaKnown RBP20.25■□□□□ 0.83
SNIP1-203ENST00000493916 SRXN1Q9BYN0 137 aa20.25■□□□□ 0.83
SNIP1-203ENST00000493916 SLC25A37Q9NYZ2 338 aa20.25■□□□□ 0.83
SNIP1-203ENST00000493916 EMC9Q9Y3B6 208 aa20.25■□□□□ 0.83
SNIP1-203ENST00000493916 MYO9AB2RTY4 2548 aa20.24■□□□□ 0.83
SNIP1-203ENST00000493916 PLGP00747 810 aaPredicted RBP20.24■□□□□ 0.83
SNIP1-203ENST00000493916 PABPC4LP0CB38 370 aaKnown RBP20.24■□□□□ 0.83
SNIP1-203ENST00000493916 IL7RP16871 459 aa20.24■□□□□ 0.83
SNIP1-203ENST00000493916 CPOXP36551 454 aa20.24■□□□□ 0.83
SNIP1-203ENST00000493916 MERTKQ12866 999 aa20.24■□□□□ 0.83
SNIP1-203ENST00000493916 PAGE3Q5JUK9 113 aa20.24■□□□□ 0.83
SNIP1-203ENST00000493916 ZNF563Q8TA94 476 aa20.24■□□□□ 0.83
SNIP1-203ENST00000493916 SLC25A43Q8WUT9 341 aaPredicted RBP20.24■□□□□ 0.83
SNIP1-203ENST00000493916 TMEM19Q96HH6 336 aa20.24■□□□□ 0.83
SNIP1-203ENST00000493916 CCDC106Q9BWC9 280 aa20.24■□□□□ 0.83
SNIP1-203ENST00000493916 OPN3Q9H1Y3 402 aaPredicted RBP20.24■□□□□ 0.83
SNIP1-203ENST00000493916 A4GALTQ9NPC4 353 aa20.24■□□□□ 0.83
SNIP1-203ENST00000493916 SERINC1Q9NRX5 453 aa20.24■□□□□ 0.83
SNIP1-203ENST00000493916 PROCRQ9UNN8 238 aa20.24■□□□□ 0.83
SNIP1-203ENST00000493916 TRBV5-3A0A0A0MS03 114 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 A0A0G2JND7 137 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 A0A1W2PP18 115 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 FAM221AA4D161 298 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 TMEM247A6NEH6 219 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 FAAHO00519 579 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 ADAM11O75078 769 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 CTAG2O75638 210 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 EPXP11678 715 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 NCF2P19878 526 aaPredicted RBP20.23■□□□□ 0.83
SNIP1-203ENST00000493916 PPIBP23284 216 aaKnown RBP20.23■□□□□ 0.83
SNIP1-203ENST00000493916 SLC7A1P30825 629 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 RYKP34925 604 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 APOBEC1P41238 236 aaKnown RBP20.23■□□□□ 0.83
SNIP1-203ENST00000493916 CTBP2P56545 445 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 DAZAP2Q15038 168 aaPredicted RBP20.23■□□□□ 0.83
SNIP1-203ENST00000493916 LIN52Q52LA3 116 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 MRPL2Q5T653 305 aaKnown RBP20.23■□□□□ 0.83
SNIP1-203ENST00000493916 PRAMEF8Q5VWM4 474 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 PRAMEF7Q5VXH5 474 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 GTF2IRD2BQ6EKJ0 949 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 ZNF474Q6S9Z5 364 aaPredicted RBP20.23■□□□□ 0.83
SNIP1-203ENST00000493916 GRINAQ7Z429 371 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 GTF2IRD2Q86UP8 949 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 TMEM200AQ86VY9 491 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 HEATR5AQ86XA9 2040 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 ATP6V1C2Q8NEY4 427 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 REXO5Q96IC2 774 aaKnown RBP20.23■□□□□ 0.83
SNIP1-203ENST00000493916 ELOVL5Q9NYP7 299 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 SLAMF8Q9P0V8 285 aa20.23■□□□□ 0.83
SNIP1-203ENST00000493916 SPIN1Q9Y657 262 aaPredicted RBP20.23■□□□□ 0.83
SNIP1-203ENST00000493916 A0A0G2JPF8 293 aa20.22■□□□□ 0.83
SNIP1-203ENST00000493916 A6NNC1 897 aa20.22■□□□□ 0.83
SNIP1-203ENST00000493916 HNRNPCL2B2RXH8 293 aa20.22■□□□□ 0.83
SNIP1-203ENST00000493916 HNRNPCL3B7ZW38 293 aa20.22■□□□□ 0.83
SNIP1-203ENST00000493916 HNRNPCL1O60812 293 aaKnown RBP20.22■□□□□ 0.83
SNIP1-203ENST00000493916 THBS1P07996 1170 aa20.22■□□□□ 0.83
SNIP1-203ENST00000493916 HNRNPCL4P0DMR1 293 aa20.22■□□□□ 0.83
SNIP1-203ENST00000493916 CD79BP40259 229 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms