RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 TMPRSS5Q9H3S3 457 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 TRAPPC2LQ9UL33 140 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 SLC22A7Q9Y694 548 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 ENPP4Q9Y6X5 453 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 DLC1Q96QB1 1528 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 SULT2B1O00204 365 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 MT-ND4LP03901 98 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 OPRL1P41146 370 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 ETV1P50549 477 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 RPL11P62913 178 aaKnown RBP7.4□□□□□ -1.22
BRCA1-221ENST00000493795 LTBQ06643 244 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 EBPQ15125 230 aaKnown RBP7.4□□□□□ -1.22
BRCA1-221ENST00000493795 VAMP3Q15836 100 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 PROX2Q3B8N5 592 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 LPCAT3Q6P1A2 487 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 CNTN4Q8IWV2 1026 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 SLC24A4Q8NFF2 622 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 RNF141Q8WVD5 230 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 CORO2AQ92828 525 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 SGIP1Q9BQI5 828 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 ARHGAP39Q9C0H5 1083 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 GAR1Q9NY12 217 aaKnown RBP7.4□□□□□ -1.22
BRCA1-221ENST00000493795 PCDHGA1Q9Y5H4 931 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 POM121CA8CG34 1229 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 H3BML4 177 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 HPGDSO60760 199 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 LEFTY1O75610 366 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 RAB40ALP0C0E4 278 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 SBK2P0C263 348 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 OR8U8P0C7N1 319 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 CBR1P16152 277 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 GLB1P16278 677 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 NME2P22392 152 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 AADACP22760 399 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 TRIM23P36406 574 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 ETV4P43268 484 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 RAB7AP51149 207 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 OR7A5Q15622 319 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 LCN8Q6JVE9 175 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 BLOC1S3Q6QNY0 202 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 C15orf52Q6ZUT6 534 aaKnown RBP7.4□□□□□ -1.22
BRCA1-221ENST00000493795 C4orf32Q8N8J7 132 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 OR51L1Q8NGJ5 315 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 GIMAP1Q8WWP7 306 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 RAB40AQ8WXH6 277 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 APH1AQ96BI3 265 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 C11orf49Q9H6J7 331 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 UFSP2Q9NUQ7 469 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 ENPP5Q9UJA9 477 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 IER3IP1Q9Y5U9 82 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 ARL2-SNX15V9GYD0 113 aa7.4□□□□□ -1.22
BRCA1-221ENST00000493795 RNF17Q9BXT8 1623 aaKnown RBP7.4□□□□□ -1.23
BRCA1-221ENST00000493795 TCAPO15273 167 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF207O43670 478 aaKnown RBP7.4□□□□□ -1.23
BRCA1-221ENST00000493795 CDK4P11802 303 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 CSN1S1P47710 185 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 GIPRP48546 466 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 EMP2P54851 167 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 UBE2G1P62253 170 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 ARG2P78540 354 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 RAB40BQ12829 278 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 CAMK2BQ13554 666 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 SERTAD2Q14140 314 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF266Q14584 549 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 FXNQ16595 210 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 TECRLQ5HYJ1 363 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 FAM162BQ5T6X4 162 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 ESPNLQ6ZVH7 1005 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 LRRC28Q86X40 367 aaPredicted RBP7.4□□□□□ -1.23
BRCA1-221ENST00000493795 M1APQ8TC57 530 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 PIGCQ92535 297 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 PELI2Q9HAT8 420 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 NGBQ9NPG2 151 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 INIPQ9NRY2 104 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 DCAF16Q9NXF7 216 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 BABAM2Q9NXR7 383 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 APOBEC3BQ9UH17 382 aaKnown RBP7.4□□□□□ -1.23
BRCA1-221ENST00000493795 FAM96BQ9Y3D0 163 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 SOCS6O14544 535 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 THBS1P07996 1170 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 KCNE1P15382 129 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 FUT1P19526 365 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 OMGP23515 440 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 SSTR4P31391 388 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 GABRA4P48169 554 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 CHRNEQ04844 493 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 RBPJQ06330 500 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 GAB1Q13480 694 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 TESK1Q15569 626 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 NADSYN1Q6IA69 706 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 Q6ZVL8 140 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 CATSPERDQ86XM0 798 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 SDR9C7Q8NEX9 313 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 OR10R2Q8NGX6 335 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 HUS1BQ8NHY5 278 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 ASB17Q8WXJ9 295 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 RNF32Q9H0A6 362 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 SLC22A11Q9NSA0 550 aa7.4□□□□□ -1.23
BRCA1-221ENST00000493795 SPATA6Q9NWH7 488 aaPredicted RBP7.4□□□□□ -1.23
BRCA1-221ENST00000493795 NSA2O95478 260 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms