RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 KRT33AO76009 404 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 AQP8O94778 261 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 AKR7A3O95154 331 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 RLN1P04808 185 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 CRYBA1P05813 215 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 ZNF806P0C7X5 589 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 CLUP10909 449 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 ITGB8P26012 769 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 RFC3P40938 356 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 HCCSP53701 268 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 TRAM2Q15035 370 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 CCL14Q16627 93 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 ELFN2Q5R3F8 820 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 NIPAL3Q6P499 406 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 ZNF704Q6ZNC4 412 aaPredicted RBP10.85□□□□□ -0.67
HDAC4-210ENST00000493582 ZNF620Q6ZNG0 422 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 VRK2Q86Y07 508 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 TMEM255BQ8WV15 326 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 FCAMRQ8WWV6 532 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 F2RL3Q96RI0 385 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 TAS2R10Q9NYW0 307 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 DYRK1BQ9Y463 629 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 KCNE3Q9Y6H6 103 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 SNRPGP15A8MWD9 76 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 PLPP1O14494 284 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 STX11O75558 287 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 ECDO95905 644 aaPredicted RBP10.85□□□□□ -0.67
HDAC4-210ENST00000493582 FOSL1P15407 271 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 CNR1P21554 472 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 STPG1Q5TH74 334 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 C11orf88Q6PI97 169 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 RBMS3Q6XE24 437 aaKnown RBP10.85□□□□□ -0.67
HDAC4-210ENST00000493582 FCRLAQ7L513 359 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 OR14A16Q8NHC5 309 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 TCEAL4Q96EI5 215 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 LYSMD1Q96S90 227 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 EFCAB11Q9BUY7 163 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 JAM3Q9BX67 310 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 NEUROD4Q9HD90 331 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 ZCCHC3Q9NUD5 404 aaKnown RBP10.85□□□□□ -0.67
HDAC4-210ENST00000493582 RASL12Q9NYN1 266 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 B4GALT6Q9UBX8 382 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 A0A0G2JN53 185 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 TMEM200CA6NKL6 621 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 GABARAPH6UMI1 98 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 SSX5O60225 188 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 CBR1P16152 277 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 NOS3P29474 1203 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 GMFBP60983 142 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 RPS15P62841 145 aaKnown RBP10.85□□□□□ -0.67
HDAC4-210ENST00000493582 RBMS2Q15434 407 aaKnown RBP10.85□□□□□ -0.67
HDAC4-210ENST00000493582 PAN3Q58A45 887 aaKnown RBP10.85□□□□□ -0.67
HDAC4-210ENST00000493582 UBE2NLQ5JXB2 153 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 FAM199XQ6PEV8 388 aaPredicted RBP10.85□□□□□ -0.67
HDAC4-210ENST00000493582 GLB1LQ6UWU2 654 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 Q6ZVL8 140 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 SSX6Q7RTT6 188 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 RFLNBQ8N5W9 214 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 DCAF4L2Q8NA75 395 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 SP7Q8TDD2 431 aaPredicted RBP10.85□□□□□ -0.67
HDAC4-210ENST00000493582 BRIX1Q8TDN6 353 aaKnown RBP10.85□□□□□ -0.67
HDAC4-210ENST00000493582 PXYLP1Q8TE99 480 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 GLYATL2Q8WU03 294 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 SLC35G5Q96KT7 338 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 OR14A2Q96R54 314 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 C19orf43Q9BQ61 176 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 TMEM138Q9NPI0 162 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 EQTNQ9NQ60 294 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 STARD7Q9NQZ5 370 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 FBXL4Q9UKA2 621 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 FBXL3Q9UKT7 428 aa10.85□□□□□ -0.67
HDAC4-210ENST00000493582 KIF26AQ9ULI4 1882 aaPredicted RBP10.84□□□□□ -0.67
HDAC4-210ENST00000493582 PRRC2BQ5JSZ5 2229 aaKnown RBP10.84□□□□□ -0.67
HDAC4-210ENST00000493582 TRBV23-1A0A0A0MS06 115 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 UBE2QL1A1L167 161 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 NAP1L6A6NFF2 107 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 TO15178 435 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 SNAPC5O75971 98 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 NDUFB6O95139 128 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 ZGLP1P0C6A0 271 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 NDUFV2P19404 249 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 STAT5AP42229 794 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 PCBP4P57723 403 aaKnown RBP10.84□□□□□ -0.67
HDAC4-210ENST00000493582 AP3S2P59780 193 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 FUT5Q11128 374 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 BEX5Q5H9J7 111 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 CLLU1OSQ5K130 101 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 ADCK2Q7Z695 626 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 MUC20Q8N307 709 aaPredicted RBP10.84□□□□□ -0.67
HDAC4-210ENST00000493582 ZNF433Q8N7K0 673 aaPredicted RBP10.84□□□□□ -0.67
HDAC4-210ENST00000493582 CAMKVQ8NCB2 501 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 DIO2Q92813 273 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 PLD4Q96BZ4 506 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 PITHD1Q9GZP4 211 aaPredicted RBP10.84□□□□□ -0.67
HDAC4-210ENST00000493582 MRPL17Q9NRX2 175 aaKnown RBP10.84□□□□□ -0.67
HDAC4-210ENST00000493582 MED17Q9NVC6 651 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 ITGA10O75578 1167 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 CXCL14O95715 111 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 IGSF6O95976 241 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 THY1P04216 161 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms