RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 SPOCK1Q08629 439 aa12.75□□□□□ -0.37
TRIM11-204ENST00000493030 MGAT3Q09327 533 aa12.75□□□□□ -0.37
TRIM11-204ENST00000493030 OPN5Q6U736 354 aa12.75□□□□□ -0.37
TRIM11-204ENST00000493030 MMP21Q8N119 569 aa12.75□□□□□ -0.37
TRIM11-204ENST00000493030 ATOH1Q92858 354 aaPredicted RBP12.75□□□□□ -0.37
TRIM11-204ENST00000493030 NUP188Q5SRE5 1749 aa12.75□□□□□ -0.37
TRIM11-204ENST00000493030 TMEM269A0A1B0GVZ9 245 aa12.75□□□□□ -0.37
TRIM11-204ENST00000493030 BCAS1O75363 584 aaPredicted RBP12.75□□□□□ -0.37
TRIM11-204ENST00000493030 LIPCP11150 499 aa12.75□□□□□ -0.37
TRIM11-204ENST00000493030 RAB40BQ12829 278 aa12.75□□□□□ -0.37
TRIM11-204ENST00000493030 TMEM244Q5VVB8 128 aa12.75□□□□□ -0.37
TRIM11-204ENST00000493030 ELP2Q6IA86 826 aa12.75□□□□□ -0.37
TRIM11-204ENST00000493030 OR7E24Q6IFN5 339 aa12.75□□□□□ -0.37
TRIM11-204ENST00000493030 LCN10Q6JVE6 187 aa12.75□□□□□ -0.37
TRIM11-204ENST00000493030 PIWIL3Q7Z3Z3 882 aaKnown RBP12.75□□□□□ -0.37
TRIM11-204ENST00000493030 TCTN2Q96GX1 697 aa12.75□□□□□ -0.37
TRIM11-204ENST00000493030 SSX3Q99909 188 aa12.75□□□□□ -0.37
TRIM11-204ENST00000493030 KLHL42Q9P2K6 505 aa12.75□□□□□ -0.37
TRIM11-204ENST00000493030 ZBTB42B2RXF5 422 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 SIGLEC6O43699 453 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 IGHG1P01857 330 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 SERPINA2P20848 420 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 RAB5BP61020 215 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 CNN3Q15417 329 aaKnown RBP12.74□□□□□ -0.37
TRIM11-204ENST00000493030 PRAMEF20Q5VT98 475 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 BORAQ6PGQ7 559 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 CNTN4Q8IWV2 1026 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 PIGCQ92535 297 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 ARRDC3Q96B67 414 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 MMP28Q9H239 520 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 EGFP01133 1207 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 EN2P19622 333 aaPredicted RBP12.74□□□□□ -0.37
TRIM11-204ENST00000493030 KRBOX4Q5JUW0 171 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 AGBL5Q8NDL9 886 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 KLHDC9Q8NEP7 349 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 OR4K15Q8NH41 348 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 GORASP2Q9H8Y8 452 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 PRSS16Q9NQE7 514 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 MED16Q9Y2X0 877 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 HHLA1C9JL84 531 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 CD63P08962 238 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 ACPPP15309 386 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 MRPL2Q5T653 305 aaKnown RBP12.74□□□□□ -0.37
TRIM11-204ENST00000493030 GPR149Q86SP6 731 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 DCBLD2Q96PD2 775 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 SLC22A12Q96S37 553 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 DYNLRB1Q9NP97 96 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 SLAMF8Q9P0V8 285 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 FOXE1O00358 373 aaPredicted RBP12.74□□□□□ -0.37
TRIM11-204ENST00000493030 SPDEFO95238 335 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 PTPN6P29350 595 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 C19orf47Q8N9M1 422 aaKnown RBP12.74□□□□□ -0.37
TRIM11-204ENST00000493030 ZNF845Q96IR2 970 aaPredicted RBP12.74□□□□□ -0.37
TRIM11-204ENST00000493030 AGPAT4Q9NRZ5 378 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 HHLA2Q9UM44 414 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 BOKQ9UMX3 212 aaPredicted RBP12.74□□□□□ -0.37
TRIM11-204ENST00000493030 SIT1Q9Y3P8 196 aa12.74□□□□□ -0.37
TRIM11-204ENST00000493030 H3BMQ9 156 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 MRPL33O75394 65 aaKnown RBP12.73□□□□□ -0.37
TRIM11-204ENST00000493030 NUDT7P0C024 238 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 T-ENOLP0DO92 83 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 CD46P15529 392 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 SLC14A2Q15849 920 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 TMEM176BQ3YBM2 270 aaPredicted RBP12.73□□□□□ -0.37
TRIM11-204ENST00000493030 MOB3CQ70IA8 216 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 MFSD9Q8NBP5 474 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 OR4D6Q8NGJ1 314 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 SDSLQ96GA7 329 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 COG8Q96MW5 612 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 ZNF681Q96N22 645 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 SLC6A5Q9Y345 797 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 CACNG2Q9Y698 323 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 MYH13Q9UKX3 1938 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 ARPC4-TTLL3A0A0A6YYG9 625 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 TFP02787 698 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 OPRL1P41146 370 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 ZNF136P52737 540 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 PGGHGQ32M88 737 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 TRNP1Q6NT89 227 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 FAM198BQ6UWH4 519 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 CBLL1Q75N03 491 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 MEPCEQ7L2J0 689 aaKnown RBP12.73□□□□□ -0.37
TRIM11-204ENST00000493030 KIF18BQ86Y91 864 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 SNAPC3Q92966 411 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 SLC39A13Q96H72 371 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 HYLS1Q96M11 299 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 LRFN1Q9P244 771 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 SRPX2O60687 465 aaPredicted RBP12.73□□□□□ -0.37
TRIM11-204ENST00000493030 CBX7O95931 251 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 CSF1P09603 554 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 ADRA1AP35348 466 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 HTR2BP41595 481 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 BDH1Q02338 343 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 RAB31Q13636 194 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 GPR18Q14330 331 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 ZNF534Q76KX8 674 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 ZBED3Q96IU2 234 aaPredicted RBP12.73□□□□□ -0.37
TRIM11-204ENST00000493030 OR6C1Q96RD1 312 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 RAB9BQ9NP90 201 aa12.73□□□□□ -0.37
TRIM11-204ENST00000493030 SLAMF7Q9NQ25 335 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms