RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 GRIP1Q9Y3R0 1128 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 CLCA3PQ9Y6N3 262 aa8.65□□□□□ -1.02
BRCA1-219ENST00000491747 GCN1Q92616 2671 aaKnown RBP8.64□□□□□ -1.03
BRCA1-219ENST00000491747 EFCAB10A6NFE3 127 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 CCRL2O00421 344 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 KIAA0513O60268 411 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 MPZL2O60487 215 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 GABRB1P18505 474 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 TIA1P31483 386 aaKnown RBP eCLIP8.64□□□□□ -1.03
BRCA1-219ENST00000491747 PTGER1P34995 402 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 CD96P40200 585 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 HTR3AP46098 478 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 ASMTP46597 345 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 CRYBA2P53672 197 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 MLF1P58340 268 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 TAS2R50P59544 299 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 LRRC74AQ0VAA2 488 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 IRF3Q14653 427 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 ZNF169Q14929 603 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-219ENST00000491747 RGNQ15493 299 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 MED22Q15528 200 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 INPP5JQ15735 1006 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-219ENST00000491747 MICAQ29983 383 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 ANXA8L1Q5VT79 327 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 SLC48A1Q6P1K1 146 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 ZNF227Q86WZ6 799 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 KRT73Q86Y46 540 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 CYP4Z2PQ8N1L4 340 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 ARMC10Q8N2F6 343 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 CISD2Q8N5K1 135 aaKnown RBP8.64□□□□□ -1.03
BRCA1-219ENST00000491747 CELF2-AS1Q8N7Q2 184 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 MORN4Q8NDC4 146 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 OR1N1Q8NGS0 311 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 OR6F1Q8NGZ6 308 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 OR14A16Q8NHC5 309 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 LILRB4Q8NHJ6 448 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 C16orf78Q8WTQ4 265 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 SNRNP40Q96DI7 357 aaKnown RBP8.64□□□□□ -1.03
BRCA1-219ENST00000491747 DGAT2Q96PD7 388 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 CDCA4Q9BXL8 241 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 DEFB126Q9BYW3 111 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 RNF32Q9H0A6 362 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 RNF167Q9H6Y7 350 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 C3orf14Q9HBI5 128 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 SLAMF7Q9NQ25 335 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 NOX1Q9Y5S8 564 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 TENM4Q6N022 2769 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 A0A075B6Q4 140 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 SH3D21A4FU49 640 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 OR5H15A6NDH6 313 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 GABRR3A8MPY1 467 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 CENPBD1B2RD01 187 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 SCAMP2O15127 329 aaKnown RBP8.64□□□□□ -1.03
BRCA1-219ENST00000491747 CLPSP04118 112 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 IGKV3-11P04433 115 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 IL3P08700 152 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 NUDT7P0C024 238 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 CT62P0C5K7 136 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 LAMP1P11279 417 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 SOX18P35713 384 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 CDC42P60953 191 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 TRA2BP62995 288 aaKnown RBP8.64□□□□□ -1.03
BRCA1-219ENST00000491747 SPIBQ01892 262 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 ELOAQ14241 798 aaKnown RBP8.64□□□□□ -1.03
BRCA1-219ENST00000491747 IFI44LQ53G44 452 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 SPIN4Q56A73 249 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 CPTPQ5TA50 214 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 LGI4Q8N135 537 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 CPT1CQ8TCG5 803 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 DAZLQ92904 295 aaKnown RBP8.64□□□□□ -1.03
BRCA1-219ENST00000491747 MAL2Q969L2 176 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 MIB2Q96AX9 1013 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 RBM18Q96H35 190 aaKnown RBP8.64□□□□□ -1.03
BRCA1-219ENST00000491747 SENP5Q96HI0 755 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-219ENST00000491747 MGLLQ99685 303 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 HES7Q9BYE0 225 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 DDX28Q9NUL7 540 aaKnown RBP8.64□□□□□ -1.03
BRCA1-219ENST00000491747 ZNF226Q9NYT6 803 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 CNOT2Q9NZN8 540 aaKnown RBP8.64□□□□□ -1.03
BRCA1-219ENST00000491747 VPS4AQ9UN37 437 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 EXO1Q9UQ84 846 aaKnown RBP8.64□□□□□ -1.03
BRCA1-219ENST00000491747 TRAPPC4Q9Y296 219 aa8.64□□□□□ -1.03
BRCA1-219ENST00000491747 C1orf226A1L170 272 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 J3QKU1 62 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 ZNF354AO60765 605 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-219ENST00000491747 SLITRK5O94991 958 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 MFN2O95140 757 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 ANXA4P09525 319 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-219ENST00000491747 SLC35E2P0CK97 266 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 ALDH9A1P49189 494 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 XKP51811 444 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 CDH12P55289 794 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 MRPS15P82914 257 aaKnown RBP8.63□□□□□ -1.03
BRCA1-219ENST00000491747 FOXK1P85037 733 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 SPINK14Q6IE38 97 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 CAMKMTQ7Z624 323 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 UBQLNLQ8IYU4 475 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 OR8H2Q8N162 312 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 MDS2Q8NDY4 140 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 OR4K14Q8NGD5 310 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms