RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 POU2F3Q9UKI9 436 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 KCNS2Q9ULS6 477 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 STK38LQ9Y2H1 464 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 IGKV3D-15A0A087WSY6 115 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 M0R1B8 84 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 PDLIM1O00151 329 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 DNAJA2O60884 412 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 SEC22BO75396 215 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 PGRP06401 933 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 ITGA5P08648 1049 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 DHRS4L1P0CG22 281 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 PYGBP11216 843 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 PRPH2P23942 346 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 NR4A2P43354 598 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 SUMO3P55854 103 aaPredicted RBP11.59□□□□□ -0.55
USF1-206ENST00000491629 GGTLC2Q14390 218 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 LASP1Q14847 261 aaKnown RBP11.59□□□□□ -0.55
USF1-206ENST00000491629 QPRTQ15274 297 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 SWI5Q1ZZU3 235 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 FBXW9Q5XUX1 488 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 ZNF544Q6NX49 715 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 ZCCHC12Q6PEW1 402 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 GALNT5Q7Z7M9 940 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 SLC22A9Q8IVM8 553 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 ZNF100Q8IYN0 542 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 CCNYL1Q8N7R7 359 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 TSSK3Q96PN8 268 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 SORCS2Q96PQ0 1159 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 INPP5KQ9BT40 448 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 PLA2G12AQ9BZM1 189 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 PIGUQ9H490 435 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 REEP4Q9H6H4 257 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 ACSS1Q9NUB1 689 aaPredicted RBP11.59□□□□□ -0.55
USF1-206ENST00000491629 FAM53CQ9NYF3 392 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 KCNE5Q9UJ90 142 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 TRAF6Q9Y4K3 522 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 TRRAPQ9Y4A5 3859 aa11.59□□□□□ -0.55
USF1-206ENST00000491629 CENPVL1A0A0U1RR11 272 aa11.58□□□□□ -0.56
USF1-206ENST00000491629 CCDC151A5D8V7 595 aa11.58□□□□□ -0.56
USF1-206ENST00000491629 CSF3P09919 207 aa11.58□□□□□ -0.56
USF1-206ENST00000491629 SLC7A1P30825 629 aa11.58□□□□□ -0.56
USF1-206ENST00000491629 DIO1P49895 249 aa11.58□□□□□ -0.56
USF1-206ENST00000491629 TIGD2Q4W5G0 525 aa11.58□□□□□ -0.56
USF1-206ENST00000491629 RFTN2Q52LD8 501 aaPredicted RBP11.58□□□□□ -0.56
USF1-206ENST00000491629 CLEC6AQ6EIG7 209 aa11.58□□□□□ -0.56
USF1-206ENST00000491629 CDC73Q6P1J9 531 aa11.58□□□□□ -0.56
USF1-206ENST00000491629 FRMD7Q6ZUT3 714 aa11.58□□□□□ -0.56
USF1-206ENST00000491629 SSX8Q7RTT4 187 aa11.58□□□□□ -0.56
USF1-206ENST00000491629 RFWD2Q8NHY2 731 aa11.58□□□□□ -0.56
USF1-206ENST00000491629 MZB1Q8WU39 189 aa11.58□□□□□ -0.56
USF1-206ENST00000491629 JADE3Q92613 823 aa11.58□□□□□ -0.56
USF1-206ENST00000491629 C3orf49Q96BT1 292 aa11.58□□□□□ -0.56
USF1-206ENST00000491629 PPCDCQ96CD2 204 aa11.58□□□□□ -0.56
USF1-206ENST00000491629 MUS81Q96NY9 551 aa11.58□□□□□ -0.56
USF1-206ENST00000491629 FOXN4Q96NZ1 517 aa11.58□□□□□ -0.56
USF1-206ENST00000491629 OR5B2Q96R09 309 aa11.58□□□□□ -0.56
USF1-206ENST00000491629 STACQ99469 402 aa11.58□□□□□ -0.56
USF1-206ENST00000491629 TUBB1Q9H4B7 451 aa11.58□□□□□ -0.56
USF1-206ENST00000491629 GPATCH2Q9NW75 528 aa11.58□□□□□ -0.56
USF1-206ENST00000491629 SH3BP4Q9P0V3 963 aa11.58□□□□□ -0.56
USF1-206ENST00000491629 VGLL3A8MV65 326 aa11.57□□□□□ -0.56
USF1-206ENST00000491629 ATP6V1G2-DDX39BF2Z307 99 aa11.57□□□□□ -0.56
USF1-206ENST00000491629 HSPA4LO95757 839 aa11.57□□□□□ -0.56
USF1-206ENST00000491629 ITGA2P17301 1181 aa11.57□□□□□ -0.56
USF1-206ENST00000491629 CFPP27918 469 aa11.57□□□□□ -0.56
USF1-206ENST00000491629 ATP12AP54707 1039 aa11.57□□□□□ -0.56
USF1-206ENST00000491629 SKP2Q13309 424 aa11.57□□□□□ -0.56
USF1-206ENST00000491629 CR1LQ2VPA4 569 aa11.57□□□□□ -0.56
USF1-206ENST00000491629 DCST2Q5T1A1 773 aa11.57□□□□□ -0.56
USF1-206ENST00000491629 KLHL17Q6TDP4 642 aa11.57□□□□□ -0.56
USF1-206ENST00000491629 TMPPEQ6ZT21 453 aa11.57□□□□□ -0.56
USF1-206ENST00000491629 OLIG3Q7RTU3 272 aa11.57□□□□□ -0.56
USF1-206ENST00000491629 MEX3DQ86XN8 651 aaKnown RBP11.57□□□□□ -0.56
USF1-206ENST00000491629 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.57□□□□□ -0.56
USF1-206ENST00000491629 ZNF527Q8NB42 609 aa11.57□□□□□ -0.56
USF1-206ENST00000491629 OR52E4Q8NGH9 312 aa11.57□□□□□ -0.56
USF1-206ENST00000491629 OR5W2Q8NH69 310 aa11.57□□□□□ -0.56
USF1-206ENST00000491629 ZFP28Q8NHY6 868 aa11.57□□□□□ -0.56
USF1-206ENST00000491629 DNAJA3Q96EY1 480 aa11.57□□□□□ -0.56
USF1-206ENST00000491629 METTL2AQ96IZ6 378 aaKnown RBP11.57□□□□□ -0.56
USF1-206ENST00000491629 CCT7Q99832 543 aa11.57□□□□□ -0.56
USF1-206ENST00000491629 ZCCHC3Q9NUD5 404 aaKnown RBP11.57□□□□□ -0.56
USF1-206ENST00000491629 C1orf109Q9NX04 203 aa11.57□□□□□ -0.56
USF1-206ENST00000491629 MALT1Q9UDY8 824 aa11.57□□□□□ -0.56
USF1-206ENST00000491629 ATP23Q9Y6H3 246 aa11.57□□□□□ -0.56
USF1-206ENST00000491629 CIB4A0PJX0 185 aa11.56□□□□□ -0.56
USF1-206ENST00000491629 CCT8L1PA6NM43 557 aa11.56□□□□□ -0.56
USF1-206ENST00000491629 GTPBP1O00178 669 aaKnown RBP11.56□□□□□ -0.56
USF1-206ENST00000491629 BCAS1O75363 584 aaPredicted RBP11.56□□□□□ -0.56
USF1-206ENST00000491629 TGFAP01135 160 aa11.56□□□□□ -0.56
USF1-206ENST00000491629 APEHP13798 732 aaKnown RBP11.56□□□□□ -0.56
USF1-206ENST00000491629 IL2RGP31785 369 aa11.56□□□□□ -0.56
USF1-206ENST00000491629 APOBEC3AP31941 199 aaPredicted RBP11.56□□□□□ -0.56
USF1-206ENST00000491629 PDLIM4P50479 330 aa11.56□□□□□ -0.56
USF1-206ENST00000491629 SESN3P58005 492 aa11.56□□□□□ -0.56
USF1-206ENST00000491629 PDK3Q15120 406 aa11.56□□□□□ -0.56
USF1-206ENST00000491629 PDZK1Q5T2W1 519 aa11.56□□□□□ -0.56
USF1-206ENST00000491629 C9orf135Q5VTT2 229 aa11.56□□□□□ -0.56
USF1-206ENST00000491629 C8orf74Q6P047 294 aa11.56□□□□□ -0.56
USF1-206ENST00000491629 C3orf33Q6P1S2 294 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms