RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 ZNF350Q9GZX5 532 aa16.34■□□□□ 0.21
SMIM4-205ENST00000491607 LAT2Q9GZY6 243 aa16.34■□□□□ 0.21
SMIM4-205ENST00000491607 CXorf56Q9H5V9 222 aa16.34■□□□□ 0.21
SMIM4-205ENST00000491607 SERINC1Q9NRX5 453 aa16.34■□□□□ 0.21
SMIM4-205ENST00000491607 NIPBLQ6KC79 2804 aaeCLIP16.33■□□□□ 0.21
SMIM4-205ENST00000491607 C9JVG2 144 aa16.33■□□□□ 0.2
SMIM4-205ENST00000491607 TM9SF1O15321 606 aa16.33■□□□□ 0.2
SMIM4-205ENST00000491607 H6PDO95479 791 aa16.33■□□□□ 0.2
SMIM4-205ENST00000491607 AGR2O95994 175 aa16.33■□□□□ 0.2
SMIM4-205ENST00000491607 PGCP20142 388 aa16.33■□□□□ 0.2
SMIM4-205ENST00000491607 UQCRC2P22695 453 aa16.33■□□□□ 0.2
SMIM4-205ENST00000491607 RASGEF1BQ0VAM2 473 aa16.33■□□□□ 0.2
SMIM4-205ENST00000491607 MERTKQ12866 999 aa16.33■□□□□ 0.2
SMIM4-205ENST00000491607 TAB1Q15750 504 aa16.33■□□□□ 0.2
SMIM4-205ENST00000491607 ANXA8L1Q5VT79 327 aa16.33■□□□□ 0.2
SMIM4-205ENST00000491607 TNFAIP8L2Q6P589 184 aaPredicted RBP16.33■□□□□ 0.2
SMIM4-205ENST00000491607 EIF3MQ7L2H7 374 aaKnown RBP16.33■□□□□ 0.2
SMIM4-205ENST00000491607 MREGQ8N565 214 aa16.33■□□□□ 0.2
SMIM4-205ENST00000491607 ZNF611Q8N823 705 aa16.33■□□□□ 0.2
SMIM4-205ENST00000491607 RAB3IL1Q8TBN0 382 aa16.33■□□□□ 0.2
SMIM4-205ENST00000491607 TMEM234Q8WY98 164 aa16.33■□□□□ 0.2
SMIM4-205ENST00000491607 ST8SIA1Q92185 356 aa16.33■□□□□ 0.2
SMIM4-205ENST00000491607 RAB8BQ92930 207 aa16.33■□□□□ 0.2
SMIM4-205ENST00000491607 ZNF775Q96BV0 537 aaPredicted RBP16.33■□□□□ 0.2
SMIM4-205ENST00000491607 PSD2Q9BQI7 771 aa16.33■□□□□ 0.2
SMIM4-205ENST00000491607 TMEM204Q9BSN7 226 aa16.33■□□□□ 0.2
SMIM4-205ENST00000491607 NUF2Q9BZD4 464 aa16.33■□□□□ 0.2
SMIM4-205ENST00000491607 ESRP2Q9H6T0 727 aaKnown RBP16.33■□□□□ 0.2
SMIM4-205ENST00000491607 NGBQ9NPG2 151 aa16.33■□□□□ 0.2
SMIM4-205ENST00000491607 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.33■□□□□ 0.2
SMIM4-205ENST00000491607 WDR45Q9Y484 360 aa16.33■□□□□ 0.2
SMIM4-205ENST00000491607 RNF115Q9Y4L5 304 aa16.33■□□□□ 0.2
SMIM4-205ENST00000491607 RAI1Q7Z5J4 1906 aaPredicted RBP16.33■□□□□ 0.2
SMIM4-205ENST00000491607 PRSS51A0A1B0GVH4 220 aa16.32■□□□□ 0.2
SMIM4-205ENST00000491607 ETV2O00321 342 aaPredicted RBP16.32■□□□□ 0.2
SMIM4-205ENST00000491607 SMAD9O15198 467 aaKnown RBP16.32■□□□□ 0.2
SMIM4-205ENST00000491607 SNUPNO95149 360 aaKnown RBP16.32■□□□□ 0.2
SMIM4-205ENST00000491607 BGNP21810 368 aa16.32■□□□□ 0.2
SMIM4-205ENST00000491607 CHI3L1P36222 383 aaPredicted RBP16.32■□□□□ 0.2
SMIM4-205ENST00000491607 SESN3P58005 492 aa16.32■□□□□ 0.2
SMIM4-205ENST00000491607 ITGADQ13349 1161 aa16.32■□□□□ 0.2
SMIM4-205ENST00000491607 P2RY6Q15077 328 aa16.32■□□□□ 0.2
SMIM4-205ENST00000491607 MAPK14Q16539 360 aa16.32■□□□□ 0.2
SMIM4-205ENST00000491607 HEPHL1Q6MZM0 1159 aa16.32■□□□□ 0.2
SMIM4-205ENST00000491607 ZNF563Q8TA94 476 aa16.32■□□□□ 0.2
SMIM4-205ENST00000491607 MIPOL1Q8TD10 442 aa16.32■□□□□ 0.2
SMIM4-205ENST00000491607 HSD17B8Q92506 261 aa16.32■□□□□ 0.2
SMIM4-205ENST00000491607 SORT1Q99523 831 aa16.32■□□□□ 0.2
SMIM4-205ENST00000491607 BCO1Q9HAY6 547 aa16.32■□□□□ 0.2
SMIM4-205ENST00000491607 SSU72Q9NP77 194 aaKnown RBP16.32■□□□□ 0.2
SMIM4-205ENST00000491607 KCNK9Q9NPC2 374 aa16.32■□□□□ 0.2
SMIM4-205ENST00000491607 PRSS50Q9UI38 385 aa16.32■□□□□ 0.2
SMIM4-205ENST00000491607 LAMP3Q9UQV4 416 aa16.32■□□□□ 0.2
SMIM4-205ENST00000491607 ZNF814B7Z6K7 855 aa16.31■□□□□ 0.2
SMIM4-205ENST00000491607 KIAA0513O60268 411 aa16.31■□□□□ 0.2
SMIM4-205ENST00000491607 LYZL6O75951 148 aa16.31■□□□□ 0.2
SMIM4-205ENST00000491607 CNOT4O95628 575 aaKnown RBP16.31■□□□□ 0.2
SMIM4-205ENST00000491607 CD3EP07766 207 aa16.31■□□□□ 0.2
SMIM4-205ENST00000491607 LBPP18428 481 aa16.31■□□□□ 0.2
SMIM4-205ENST00000491607 OR3A2P47893 321 aa16.31■□□□□ 0.2
SMIM4-205ENST00000491607 DIO1P49895 249 aa16.31■□□□□ 0.2
SMIM4-205ENST00000491607 KHKP50053 298 aa16.31■□□□□ 0.2
SMIM4-205ENST00000491607 ATP5J2P56134 94 aa16.31■□□□□ 0.2
SMIM4-205ENST00000491607 PHC1P78364 1004 aa16.31■□□□□ 0.2
SMIM4-205ENST00000491607 HPCAP84074 193 aa16.31■□□□□ 0.2
SMIM4-205ENST00000491607 STK11Q15831 433 aa16.31■□□□□ 0.2
SMIM4-205ENST00000491607 SPANXN4Q5MJ08 99 aa16.31■□□□□ 0.2
SMIM4-205ENST00000491607 TYW3Q6IPR3 259 aaKnown RBP16.31■□□□□ 0.2
SMIM4-205ENST00000491607 BHLHA15Q7RTS1 189 aaPredicted RBP16.31■□□□□ 0.2
SMIM4-205ENST00000491607 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.31■□□□□ 0.2
SMIM4-205ENST00000491607 HMGN2P46Q86SG4 172 aa16.31■□□□□ 0.2
SMIM4-205ENST00000491607 IGFBPL1Q8WX77 278 aa16.31■□□□□ 0.2
SMIM4-205ENST00000491607 TESCQ96BS2 214 aa16.31■□□□□ 0.2
SMIM4-205ENST00000491607 ROPN1LQ96C74 230 aa16.31■□□□□ 0.2
SMIM4-205ENST00000491607 ZNF300Q96RE9 604 aaPredicted RBP16.31■□□□□ 0.2
SMIM4-205ENST00000491607 PAIP2Q9BPZ3 127 aaKnown RBP16.31■□□□□ 0.2
SMIM4-205ENST00000491607 SLC35A5Q9BS91 424 aa16.31■□□□□ 0.2
SMIM4-205ENST00000491607 POTEKPQ9BYX7 375 aa16.31■□□□□ 0.2
SMIM4-205ENST00000491607 MARCOQ9UEW3 520 aaPredicted RBP16.31■□□□□ 0.2
SMIM4-205ENST00000491607 ING1Q9UK53 422 aaPredicted RBP16.31■□□□□ 0.2
SMIM4-205ENST00000491607 SLC35A3Q9Y2D2 325 aa16.31■□□□□ 0.2
SMIM4-205ENST00000491607 SULT2B1O00204 365 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 CYTIPO60759 359 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 DNAJA2O60884 412 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 SCN2BO60939 215 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 FESP07332 822 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 DHRS4L1P0CG22 281 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 TFPIP10646 304 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 RYKP34925 604 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 PGM1P36871 562 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 CLNS1AP54105 237 aaKnown RBP16.3■□□□□ 0.2
SMIM4-205ENST00000491607 NME5P56597 212 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 CSNK2A1P68400 391 aaPredicted RBP16.3■□□□□ 0.2
SMIM4-205ENST00000491607 STX3Q13277 289 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 DPY19L1Q2PZI1 675 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 FAM174BQ3ZCQ3 159 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 GPAT3Q53EU6 434 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 SYT14P1Q58G82 188 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 CEP85LQ5SZL2 805 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 NCMAPQ5T1S8 102 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms