RNA–Protein interactions for RNA: ENST00000491335.1

NDUFB4-204, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 2

Gene NDUFB4, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-204ENST00000491335 MYBPHQ13203 477 aa16.62■□□□□ 0.25
NDUFB4-204ENST00000491335 VWA1Q6PCB0 445 aa16.62■□□□□ 0.25
NDUFB4-204ENST00000491335 CMIPQ8IY22 773 aa16.62■□□□□ 0.25
NDUFB4-204ENST00000491335 PEX5LQ8IYB4 626 aa16.62■□□□□ 0.25
NDUFB4-204ENST00000491335 WDR60Q8WVS4 1066 aa16.62■□□□□ 0.25
NDUFB4-204ENST00000491335 TMEM234Q8WY98 164 aa16.62■□□□□ 0.25
NDUFB4-204ENST00000491335 ZNF559Q9BR84 538 aa16.62■□□□□ 0.25
NDUFB4-204ENST00000491335 RBM24Q9BX46 236 aaKnown RBP16.62■□□□□ 0.25
NDUFB4-204ENST00000491335 TMEM120AQ9BXJ8 343 aa16.62■□□□□ 0.25
NDUFB4-204ENST00000491335 RAD21L1Q9H4I0 556 aa16.62■□□□□ 0.25
NDUFB4-204ENST00000491335 SLC24A3Q9HC58 644 aa16.62■□□□□ 0.25
NDUFB4-204ENST00000491335 MED4Q9NPJ6 270 aa16.62■□□□□ 0.25
NDUFB4-204ENST00000491335 THUMPD1Q9NXG2 353 aaKnown RBP16.62■□□□□ 0.25
NDUFB4-204ENST00000491335 CALML5Q9NZT1 146 aa16.62■□□□□ 0.25
NDUFB4-204ENST00000491335 VAPAQ9P0L0 249 aa16.62■□□□□ 0.25
NDUFB4-204ENST00000491335 PACSIN3Q9UKS6 424 aa16.62■□□□□ 0.25
NDUFB4-204ENST00000491335 MCTS1Q9ULC4 181 aaKnown RBP16.62■□□□□ 0.25
NDUFB4-204ENST00000491335 GJE1A6NN92 205 aa16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 A8MXE2 369 aa16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 ADAM11O75078 769 aa16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 DBIP07108 87 aaKnown RBP16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 VIMP08670 466 aaKnown RBP16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 NID1P14543 1247 aa16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 KIR2DL3P43628 341 aa16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 CRISP3P54108 245 aa16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 KRTAP10-9P60411 292 aa16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 SF3A3Q12874 501 aaKnown RBP eCLIP16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 FADDQ13158 208 aa16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 SELENBP1Q13228 472 aa16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 RPS26P11Q5JNZ5 115 aaPredicted RBP16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 MRPL2Q5T653 305 aaKnown RBP16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 METTL21CQ5VZV1 264 aa16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 PLEKHM3Q6ZWE6 761 aa16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 VRK2Q86Y07 508 aa16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 KIF18BQ86Y91 864 aa16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 OR52P1PQ8NH57 321 aa16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 ZNF563Q8TA94 476 aa16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 TMEM19Q96HH6 336 aa16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 MCCC2Q9HCC0 563 aa16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 EXOSC3Q9NQT5 275 aaKnown RBP16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 DNAJB12Q9NXW2 375 aaKnown RBP16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 CLEC4AQ9UMR7 237 aa16.61■□□□□ 0.25
NDUFB4-204ENST00000491335 TRBV5-3A0A0A0MS03 114 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 A0A0G2JPF8 293 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 A0A1W2PNR3 127 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 TMEM247A6NEH6 219 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 HNRNPCL2B2RXH8 293 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 HNRNPCL3B7ZW38 293 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 MSTNO14793 375 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 HNRNPCL1O60812 293 aaKnown RBP16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 SMNDC1O75940 238 aaKnown RBP eCLIP16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 CGAP01215 116 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 HNRNPCL4P0DMR1 293 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 TROVE2P10155 538 aaKnown RBP eCLIP16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 BMP2P12643 396 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 PEX19P40855 299 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 CPA2P48052 419 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 GNA13Q14344 377 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 GUSBP1Q15486 140 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 CGB2Q6NT52 195 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 DLEU7Q6UYE1 221 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 ZZZ3Q8IYH5 903 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 ROBO4Q8WZ75 1007 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 MAL2Q969L2 176 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 LURAP1Q96LR2 239 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 SRXN1Q9BYN0 137 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 COQ10BQ9H8M1 238 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 A4GALTQ9NPC4 353 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 TIGARQ9NQ88 270 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 RLIMQ9NVW2 624 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 GALNT8Q9NY28 637 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 CRIM1Q9NZV1 1036 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 DSPPQ9NZW4 1301 aa16.6■□□□□ 0.25
NDUFB4-204ENST00000491335 TACC2O95359 2948 aa16.59■□□□□ 0.25
NDUFB4-204ENST00000491335 AP3D1O14617 1153 aa16.59■□□□□ 0.25
NDUFB4-204ENST00000491335 ATP8B1O43520 1251 aa16.59■□□□□ 0.25
NDUFB4-204ENST00000491335 PPIBP23284 216 aaKnown RBP16.59■□□□□ 0.25
NDUFB4-204ENST00000491335 SLC7A1P30825 629 aa16.59■□□□□ 0.25
NDUFB4-204ENST00000491335 IDH2P48735 452 aaKnown RBP16.59■□□□□ 0.25
NDUFB4-204ENST00000491335 FAM214BQ7L5A3 538 aa16.59■□□□□ 0.25
NDUFB4-204ENST00000491335 C10orf111Q8N326 155 aa16.59■□□□□ 0.25
NDUFB4-204ENST00000491335 LINC01560Q8TB33 94 aa16.59■□□□□ 0.25
NDUFB4-204ENST00000491335 CCDC106Q9BWC9 280 aa16.59■□□□□ 0.25
NDUFB4-204ENST00000491335 OPN3Q9H1Y3 402 aaPredicted RBP16.59■□□□□ 0.25
NDUFB4-204ENST00000491335 IKZF5Q9H5V7 419 aa16.59■□□□□ 0.25
NDUFB4-204ENST00000491335 CTPS2Q9NRF8 586 aa16.59■□□□□ 0.25
NDUFB4-204ENST00000491335 SERINC1Q9NRX5 453 aa16.59■□□□□ 0.25
NDUFB4-204ENST00000491335 LEF1Q9UJU2 399 aaPredicted RBP16.59■□□□□ 0.25
NDUFB4-204ENST00000491335 NDUFAF1Q9Y375 327 aa16.59■□□□□ 0.25
NDUFB4-204ENST00000491335 POLQO75417 2590 aa16.58■□□□□ 0.25
NDUFB4-204ENST00000491335 TUBAL3A6NHL2 446 aa16.58■□□□□ 0.24
NDUFB4-204ENST00000491335 PLGP00747 810 aaPredicted RBP16.58■□□□□ 0.24
NDUFB4-204ENST00000491335 APOBEC1P41238 236 aaKnown RBP16.58■□□□□ 0.24
NDUFB4-204ENST00000491335 ARFIP2P53365 341 aa16.58■□□□□ 0.24
NDUFB4-204ENST00000491335 ZNF239Q16600 458 aaKnown RBP16.58■□□□□ 0.24
NDUFB4-204ENST00000491335 C3orf33Q6P1S2 294 aa16.58■□□□□ 0.24
NDUFB4-204ENST00000491335 ZNF474Q6S9Z5 364 aaPredicted RBP16.58■□□□□ 0.24
NDUFB4-204ENST00000491335 ZNF836Q6ZNA1 936 aa16.58■□□□□ 0.24
NDUFB4-204ENST00000491335 GRINAQ7Z429 371 aa16.58■□□□□ 0.24
NDUFB4-204ENST00000491335 RETREG3Q86VR2 466 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms