RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 KLHL40Q2TBA0 621 aa2.53□□□□□ -2
PHC3-213ENST00000491258 LRRC73Q5JTD7 316 aa2.53□□□□□ -2
PHC3-213ENST00000491258 ERMARDQ5T6L9 678 aa2.53□□□□□ -2
PHC3-213ENST00000491258 KCTD16Q68DU8 428 aa2.53□□□□□ -2
PHC3-213ENST00000491258 DNAJC24Q6P3W2 148 aa2.53□□□□□ -2
PHC3-213ENST00000491258 SCYL2Q6P3W7 929 aa2.53□□□□□ -2
PHC3-213ENST00000491258 DCUN1D2Q6PH85 259 aa2.53□□□□□ -2
PHC3-213ENST00000491258 MACC1Q6ZN28 852 aa2.53□□□□□ -2
PHC3-213ENST00000491258 CYP4V2Q6ZWL3 525 aaPredicted RBP2.53□□□□□ -2
PHC3-213ENST00000491258 DET1Q7L5Y6 550 aa2.53□□□□□ -2
PHC3-213ENST00000491258 EFL1Q7Z2Z2 1120 aaKnown RBP2.53□□□□□ -2
PHC3-213ENST00000491258 CENPVQ7Z7K6 275 aaPredicted RBP2.53□□□□□ -2
PHC3-213ENST00000491258 VPS36Q86VN1 386 aa2.53□□□□□ -2
PHC3-213ENST00000491258 NEK11Q8NG66 645 aa2.53□□□□□ -2
PHC3-213ENST00000491258 CXorf40AQ8TE69 158 aa2.53□□□□□ -2
PHC3-213ENST00000491258 ECHDC3Q96DC8 303 aa2.53□□□□□ -2
PHC3-213ENST00000491258 CELF6Q96J87 481 aaKnown RBP2.53□□□□□ -2
PHC3-213ENST00000491258 GDAP1L1Q96MZ0 367 aa2.53□□□□□ -2
PHC3-213ENST00000491258 ZNF641Q96N77 438 aaPredicted RBP2.53□□□□□ -2
PHC3-213ENST00000491258 MCEEQ96PE7 176 aa2.53□□□□□ -2
PHC3-213ENST00000491258 WRAP53Q9BUR4 548 aaKnown RBP2.53□□□□□ -2
PHC3-213ENST00000491258 APOOQ9BUR5 198 aa2.53□□□□□ -2
PHC3-213ENST00000491258 PAPOLGQ9BWT3 736 aaKnown RBP2.53□□□□□ -2
PHC3-213ENST00000491258 TRIM7Q9C029 511 aa2.53□□□□□ -2
PHC3-213ENST00000491258 LRRC19Q9H756 370 aa2.53□□□□□ -2
PHC3-213ENST00000491258 C3orf14Q9HBI5 128 aa2.53□□□□□ -2
PHC3-213ENST00000491258 DNAJC4Q9NNZ3 241 aa2.53□□□□□ -2
PHC3-213ENST00000491258 PLSCR3Q9NRY6 295 aa2.53□□□□□ -2
PHC3-213ENST00000491258 ANO10Q9NW15 660 aa2.53□□□□□ -2
PHC3-213ENST00000491258 GPATCH2LQ9NWQ4 482 aa2.53□□□□□ -2
PHC3-213ENST00000491258 NSMCE4AQ9NXX6 385 aa2.53□□□□□ -2
PHC3-213ENST00000491258 VNN3Q9NY84 501 aa2.53□□□□□ -2
PHC3-213ENST00000491258 TXNDC16Q9P2K2 825 aa2.53□□□□□ -2
PHC3-213ENST00000491258 LHX3Q9UBR4 397 aa2.53□□□□□ -2
PHC3-213ENST00000491258 RPS6KB2Q9UBS0 482 aa2.53□□□□□ -2
PHC3-213ENST00000491258 APOBEC3BQ9UH17 382 aaKnown RBP2.53□□□□□ -2
PHC3-213ENST00000491258 PCSK1NQ9UHG2 260 aa2.53□□□□□ -2
PHC3-213ENST00000491258 SPATA2Q9UM82 520 aa2.53□□□□□ -2
PHC3-213ENST00000491258 OR1A2Q9Y585 309 aa2.53□□□□□ -2
PHC3-213ENST00000491258 FAM169AQ9Y6X4 670 aa2.53□□□□□ -2
PHC3-213ENST00000491258 CACNA1EQ15878 2313 aa2.53□□□□□ -2
PHC3-213ENST00000491258 UBR5O95071 2799 aaPredicted RBP2.53□□□□□ -2
PHC3-213ENST00000491258 NAV3Q8IVL0 2385 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 KMT2EQ8IZD2 1858 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 DOCK5Q9H7D0 1870 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 TRAV24A0A0B4J272 114 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 ARHGAP42A6NI28 874 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 TMX2-CTNND1H3BSU7 103 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 K7ENP7 123 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 EEF2KO00418 725 aaKnown RBP2.52□□□□□ -2.01
PHC3-213ENST00000491258 NVLO15381 856 aaKnown RBP2.52□□□□□ -2.01
PHC3-213ENST00000491258 SIGLEC5O15389 551 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 B4GAT1O43505 415 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 PRPSAP2O60256 369 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 PALMO75781 387 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 RECQL5O94762 991 aaPredicted RBP2.52□□□□□ -2.01
PHC3-213ENST00000491258 TNFSF15O95150 251 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 IGSF6O95976 241 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 HCKP08631 526 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 ALPIP09923 528 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 CCDC172P0C7W6 258 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 F3P13726 295 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 FERP16591 822 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 ERCC2P18074 760 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 PSMA2P25787 234 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 MIPP30301 263 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 SPRP35270 261 aaPredicted RBP2.52□□□□□ -2.01
PHC3-213ENST00000491258 UGT1A5P35504 534 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 PCK1P35558 622 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 CRYBA2P53672 197 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 KIAA1024LP59773 190 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 TPI1P60174 286 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 CCL7P80098 99 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 IFI35P80217 286 aaPredicted RBP2.52□□□□□ -2.01
PHC3-213ENST00000491258 CKAP4Q07065 602 aaKnown RBP2.52□□□□□ -2.01
PHC3-213ENST00000491258 IL10RBQ08334 325 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 ELP6Q0PNE2 266 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 RALGDSQ12967 914 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 SNTB1Q13884 538 aaKnown RBP2.52□□□□□ -2.01
PHC3-213ENST00000491258 DPYSQ14117 519 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 IRF4Q15306 451 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 ELOCQ15369 112 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 STX1AQ16623 288 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 BOLA3Q53S33 107 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 ZRANB3Q5FWF4 1079 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 CGB2Q6NT52 195 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 PPP1R2P3Q6NXS1 205 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 PNCKQ6P2M8 343 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 SASS6Q6UVJ0 657 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 ENPP7Q6UWV6 458 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 ZNF571Q7Z3V5 609 aaPredicted RBP2.52□□□□□ -2.01
PHC3-213ENST00000491258 TAF8Q7Z7C8 310 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 C17orf82Q86X59 251 aaPredicted RBP2.52□□□□□ -2.01
PHC3-213ENST00000491258 GKN2Q86XP6 184 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 PSTKQ8IV42 348 aaKnown RBP2.52□□□□□ -2.01
PHC3-213ENST00000491258 ARL14Q8N4G2 192 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 NPWQ8N729 165 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 ARL10Q8N8L6 244 aa2.52□□□□□ -2.01
PHC3-213ENST00000491258 Q8N9G6 341 aaPredicted RBP2.52□□□□□ -2.01
PHC3-213ENST00000491258 BANPQ8N9N5 519 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms