RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 ZNF362Q5T0B9 420 aaPredicted RBP20.98■□□□□ 0.95
USF3-203ENST00000491165 TMEM164Q5U3C3 297 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 DGAT2L6Q6ZPD8 337 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 ZNF595Q8IYB9 648 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 DOK4Q8TEW6 326 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 TSLPQ969D9 159 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 AMDHD1Q96NU7 426 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 PRTFDC1Q9NRG1 225 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 MAN2C1Q9NTJ4 1040 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 KLK13Q9UKR3 277 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 CDRT15L2A8MXV6 281 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 AZGP1P25311 298 aaKnown RBP20.98■□□□□ 0.95
USF3-203ENST00000491165 PLA2G5P39877 138 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 TGM4P49221 684 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 ETV1P50549 477 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 IFITM2Q01629 132 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 MXD1Q05195 221 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 BAK1Q16611 211 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 NDUFA5Q16718 116 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 SLC7A5P1Q8MH63 180 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 OR4K14Q8NGD5 310 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 OR6F1Q8NGZ6 308 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 FAM122AQ96E09 287 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 PRRC1Q96M27 445 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 TGIF2Q9GZN2 237 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 VN1R1Q9GZP7 353 aa20.98■□□□□ 0.95
USF3-203ENST00000491165 VSTM2BA6NLU5 285 aa20.97■□□□□ 0.95
USF3-203ENST00000491165 GPR75O95800 540 aa20.97■□□□□ 0.95
USF3-203ENST00000491165 IL7P13232 177 aa20.97■□□□□ 0.95
USF3-203ENST00000491165 MYL12AP19105 171 aa20.97■□□□□ 0.95
USF3-203ENST00000491165 RCVRNP35243 200 aa20.97■□□□□ 0.95
USF3-203ENST00000491165 RFX2P48378 723 aa20.97■□□□□ 0.95
USF3-203ENST00000491165 SMSP52788 366 aa20.97■□□□□ 0.95
USF3-203ENST00000491165 CDK5Q00535 292 aa20.97■□□□□ 0.95
USF3-203ENST00000491165 FOXC1Q12948 553 aa20.97■□□□□ 0.95
USF3-203ENST00000491165 LTB4RQ15722 352 aa20.97■□□□□ 0.95
USF3-203ENST00000491165 KLHL22Q53GT1 634 aa20.97■□□□□ 0.95
USF3-203ENST00000491165 ACSM5Q6NUN0 579 aa20.97■□□□□ 0.95
USF3-203ENST00000491165 C1orf94Q6P1W5 598 aa20.97■□□□□ 0.95
USF3-203ENST00000491165 MED25Q71SY5 747 aa20.97■□□□□ 0.95
USF3-203ENST00000491165 CLDN22Q8N7P3 220 aa20.97■□□□□ 0.95
USF3-203ENST00000491165 MORN4Q8NDC4 146 aa20.97■□□□□ 0.95
USF3-203ENST00000491165 OR6T1Q8NGN1 323 aa20.97■□□□□ 0.95
USF3-203ENST00000491165 NEDD4LQ96PU5 975 aa20.97■□□□□ 0.95
USF3-203ENST00000491165 ANKRA2Q9H9E1 313 aa20.97■□□□□ 0.95
USF3-203ENST00000491165 MKL2Q9ULH7 1088 aa20.97■□□□□ 0.95
USF3-203ENST00000491165 CTNSO60931 367 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 LGI1O95970 557 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 GSTM3P21266 225 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 NCBP2P52298 156 aaKnown RBP eCLIP20.96■□□□□ 0.955e-9■■■■■ 31.9
USF3-203ENST00000491165 ENTPD8Q5MY95 495 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 NXNL2Q5VZ03 156 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 RAB43Q86YS6 212 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 ADAMTS18Q8TE60 1221 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 SLC26A1Q9H2B4 701 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 BCL2L10Q9HD36 194 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 PRDM9Q9NQV7 894 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 WASF3Q9UPY6 502 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 MRPS33Q9Y291 106 aaKnown RBP20.96■□□□□ 0.95
USF3-203ENST00000491165 SPIN1Q9Y657 262 aaPredicted RBP20.96■□□□□ 0.95
USF3-203ENST00000491165 CEP295Q9C0D2 2601 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 TSPAN19P0C672 248 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 CPMP14384 443 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 NTSP30990 170 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 WNT4P56705 351 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 HSD17B7P56937 341 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 HNRNPA0Q13151 305 aaKnown RBP20.96■□□□□ 0.95
USF3-203ENST00000491165 SNAPC1Q16533 368 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 C6orf15Q6UXA7 325 aaPredicted RBP20.96■□□□□ 0.95
USF3-203ENST00000491165 OLIG3Q7RTU3 272 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 SIMC1Q8NDZ2 872 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 OR9A2Q8NGT5 310 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 FGF11Q92914 225 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 PTCHD1Q96NR3 888 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 GPA33Q99795 319 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 TP63Q9H3D4 680 aaPredicted RBP20.96■□□□□ 0.95
USF3-203ENST00000491165 ZNF780BQ9Y6R6 833 aa20.96■□□□□ 0.95
USF3-203ENST00000491165 IGKV3D-11A0A0A0MRZ8 115 aa20.95■□□□□ 0.94
USF3-203ENST00000491165 IRGMA1A4Y4 181 aa20.95■□□□□ 0.94
USF3-203ENST00000491165 KLF7O75840 302 aaPredicted RBP20.95■□□□□ 0.94
USF3-203ENST00000491165 EPPINO95925 133 aa20.95■□□□□ 0.94
USF3-203ENST00000491165 S100A1P23297 94 aa20.95■□□□□ 0.94
USF3-203ENST00000491165 ANXA11P50995 505 aaKnown RBP20.95■□□□□ 0.94
USF3-203ENST00000491165 EFNB1P98172 346 aa20.95■□□□□ 0.94
USF3-203ENST00000491165 SCN1BQ07699 218 aa20.95■□□□□ 0.94
USF3-203ENST00000491165 GNA13Q14344 377 aa20.95■□□□□ 0.94
USF3-203ENST00000491165 ATAD3CQ5T2N8 411 aa20.95■□□□□ 0.94
USF3-203ENST00000491165 C22orf42Q6IC83 251 aa20.95■□□□□ 0.94
USF3-203ENST00000491165 FAM131AQ6UXB0 335 aa20.95■□□□□ 0.94
USF3-203ENST00000491165 QSOX2Q6ZRP7 698 aa20.95■□□□□ 0.94
USF3-203ENST00000491165 OTUB1Q96FW1 271 aaPredicted RBP20.95■□□□□ 0.94
USF3-203ENST00000491165 BBS4Q96RK4 519 aa20.95■□□□□ 0.94
USF3-203ENST00000491165 ABCB9Q9NP78 766 aa20.95■□□□□ 0.94
USF3-203ENST00000491165 TIGARQ9NQ88 270 aa20.95■□□□□ 0.94
USF3-203ENST00000491165 PADI1Q9ULC6 663 aa20.95■□□□□ 0.94
USF3-203ENST00000491165 ENTPD4Q9Y227 616 aa20.95■□□□□ 0.94
USF3-203ENST00000491165 A0A1W2PQ09 198 aa20.95■□□□□ 0.94
USF3-203ENST00000491165 CLDN4O14493 209 aa20.95■□□□□ 0.94
USF3-203ENST00000491165 RGS13O14921 159 aa20.95■□□□□ 0.94
USF3-203ENST00000491165 CHRM4P08173 479 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms