RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 IGFN1Q86VF2 1251 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 SIRT6Q8N6T7 355 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 RHOXF1Q8NHV9 184 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 IMMP1LQ96LU5 166 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 RASL10BQ96S79 203 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 TSSK6Q9BXA6 273 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 TRIM2Q9C040 744 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 GPR83Q9NYM4 423 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 MED11Q9P086 117 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 SLC35A3Q9Y2D2 325 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 PCNX3Q9H6A9 2034 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 CHP2O43745 196 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 FADS1O60427 444 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 APOL3O95236 402 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 C21orf33P30042 268 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-219ENST00000491128 Q0VFX4 171 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 IL18R1Q13478 541 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 ZNF613Q6PF04 617 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 WDR36Q8NI36 951 aaKnown RBP12.72□□□□□ -0.37
SMPD4-219ENST00000491128 ELP5Q8TE02 316 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 FBLIM1Q8WUP2 373 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 NACC2Q96BF6 587 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 OTULINQ96BN8 352 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 HOXD1Q9GZZ0 328 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 CDCP1Q9H5V8 836 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 PPIEQ9UNP9 301 aaKnown RBP12.72□□□□□ -0.37
SMPD4-219ENST00000491128 MED31Q9Y3C7 131 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 PCDHGA1Q9Y5H4 931 aa12.72□□□□□ -0.37
SMPD4-219ENST00000491128 BOD1L1Q8NFC6 3051 aa12.71□□□□□ -0.37
SMPD4-219ENST00000491128 LOC102723996A0A087X1L8 192 aa12.71□□□□□ -0.37
SMPD4-219ENST00000491128 CCDC160A6NGH7 325 aa12.71□□□□□ -0.37
SMPD4-219ENST00000491128 ADRA2AP08913 450 aa12.71□□□□□ -0.37
SMPD4-219ENST00000491128 NBL1P41271 181 aa12.71□□□□□ -0.37
SMPD4-219ENST00000491128 CDC42P60953 191 aa12.71□□□□□ -0.37
SMPD4-219ENST00000491128 PMS2P3Q13401 168 aa12.71□□□□□ -0.37
SMPD4-219ENST00000491128 ATP1A1-AS1Q5TC04 95 aa12.71□□□□□ -0.37
SMPD4-219ENST00000491128 ULK3Q6PHR2 472 aa12.71□□□□□ -0.37
SMPD4-219ENST00000491128 THSD4Q6ZMP0 1018 aa12.71□□□□□ -0.37
SMPD4-219ENST00000491128 CCDC81Q6ZN84 652 aa12.71□□□□□ -0.37
SMPD4-219ENST00000491128 GHDCQ8N2G8 530 aa12.71□□□□□ -0.37
SMPD4-219ENST00000491128 LSMEM1Q8N8F7 131 aa12.71□□□□□ -0.37
SMPD4-219ENST00000491128 OR4Q3Q8NH05 313 aa12.71□□□□□ -0.37
SMPD4-219ENST00000491128 NUBPLQ8TB37 319 aa12.71□□□□□ -0.37
SMPD4-219ENST00000491128 DDA1Q9BW61 102 aa12.71□□□□□ -0.37
SMPD4-219ENST00000491128 ETAA1Q9NY74 926 aa12.71□□□□□ -0.37
SMPD4-219ENST00000491128 TAS2R16Q9NYV7 291 aa12.71□□□□□ -0.37
SMPD4-219ENST00000491128 VDAC3Q9Y277 283 aa12.71□□□□□ -0.37
SMPD4-219ENST00000491128 ALG1L2C9J202 215 aa12.71□□□□□ -0.38
SMPD4-219ENST00000491128 H3BSA7 217 aa12.71□□□□□ -0.38
SMPD4-219ENST00000491128 ADAM10O14672 748 aa12.71□□□□□ -0.38
SMPD4-219ENST00000491128 KLF4O43474 513 aa12.71□□□□□ -0.38
SMPD4-219ENST00000491128 AHCYL1O43865 530 aa12.71□□□□□ -0.38
SMPD4-219ENST00000491128 FMO6PO60774 539 aa12.71□□□□□ -0.38
SMPD4-219ENST00000491128 ENTPD6O75354 484 aa12.71□□□□□ -0.38
SMPD4-219ENST00000491128 GABRB1P18505 474 aa12.71□□□□□ -0.38
SMPD4-219ENST00000491128 TACR3P29371 465 aa12.71□□□□□ -0.38
SMPD4-219ENST00000491128 IFNGR2P38484 337 aa12.71□□□□□ -0.38
SMPD4-219ENST00000491128 RPL5P46777 297 aaKnown RBP12.71□□□□□ -0.38
SMPD4-219ENST00000491128 FOXK1P85037 733 aa12.71□□□□□ -0.38
SMPD4-219ENST00000491128 ZNF468Q5VIY5 522 aaPredicted RBP12.71□□□□□ -0.38
SMPD4-219ENST00000491128 C1QL3Q5VWW1 255 aa12.71□□□□□ -0.38
SMPD4-219ENST00000491128 CASP12Q6UXS9 341 aa12.71□□□□□ -0.38
SMPD4-219ENST00000491128 B3GLCTQ6Y288 498 aa12.71□□□□□ -0.38
SMPD4-219ENST00000491128 FAM71CQ8NEG0 241 aa12.71□□□□□ -0.38
SMPD4-219ENST00000491128 OR5L2Q8NGL0 311 aa12.71□□□□□ -0.38
SMPD4-219ENST00000491128 SLC39A7Q92504 469 aa12.71□□□□□ -0.38
SMPD4-219ENST00000491128 TNFRSF13CQ96RJ3 184 aa12.71□□□□□ -0.38
SMPD4-219ENST00000491128 TBC1D23Q9NUY8 699 aa12.71□□□□□ -0.38
SMPD4-219ENST00000491128 KLRF1Q9NZS2 232 aa12.71□□□□□ -0.38
SMPD4-219ENST00000491128 FBXL4Q9UKA2 621 aa12.71□□□□□ -0.38
SMPD4-219ENST00000491128 PCDHGA3Q9Y5H0 932 aa12.71□□□□□ -0.38
SMPD4-219ENST00000491128 A0A087WXM4 84 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 OR6C70A6NIJ9 312 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 FAM183AA6NL82 134 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 OPN1LWP04000 364 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 SLC9A3P48764 834 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 GABREP78334 506 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 SRSF6Q13247 344 aaKnown RBP12.7□□□□□ -0.38
SMPD4-219ENST00000491128 SNAPC1Q16533 368 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 COL28A1Q2UY09 1125 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 CMIPQ8IY22 773 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 TEX47Q8TBZ9 253 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 TP53INP1Q96A56 240 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 ZNF700Q9H0M5 742 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 ANKRD19PQ9H560 264 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 ICAM5Q9UMF0 924 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 PRRC2CQ9Y520 2896 aaKnown RBP12.7□□□□□ -0.38
SMPD4-219ENST00000491128 UNC119BA6NIH7 251 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 FADS2O95864 444 aaKnown RBP12.7□□□□□ -0.38
SMPD4-219ENST00000491128 GUSBP08236 651 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 FPR3P25089 353 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 RPS15P62841 145 aaKnown RBP12.7□□□□□ -0.38
SMPD4-219ENST00000491128 COX10Q12887 443 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 RBM48Q5RL73 367 aaKnown RBP12.7□□□□□ -0.38
SMPD4-219ENST00000491128 SLX4IPQ5VYV7 408 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 ARSKQ6UWY0 536 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 LYPD8Q6UX82 237 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 ZNF620Q6ZNG0 422 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 SPARTQ8N0X7 666 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 C10orf53Q8N6V4 93 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms