RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ANKRD34AQ69YU3 496 aa28■■■□□ 2.07
LDB1-204ENST00000490751 HMGN2P46Q86SG4 172 aa28■■■□□ 2.07
LDB1-204ENST00000490751 FAM71CQ8NEG0 241 aa28■■■□□ 2.07
LDB1-204ENST00000490751 ZG16BQ96DA0 208 aa28■■■□□ 2.07
LDB1-204ENST00000490751 OR52B2Q96RD2 323 aa28■■■□□ 2.07
LDB1-204ENST00000490751 QRSL1Q9H0R6 528 aaKnown RBP28■■■□□ 2.07
LDB1-204ENST00000490751 C12orf49Q9H741 205 aa28■■■□□ 2.07
LDB1-204ENST00000490751 SIAH2O43255 324 aa27.99■■■□□ 2.07
LDB1-204ENST00000490751 BCAS1O75363 584 aaPredicted RBP27.99■■■□□ 2.07
LDB1-204ENST00000490751 SLC22A3O75751 556 aa27.99■■■□□ 2.07
LDB1-204ENST00000490751 ATE1O95260 518 aa27.99■■■□□ 2.07
LDB1-204ENST00000490751 H6PDO95479 791 aa27.99■■■□□ 2.07
LDB1-204ENST00000490751 PGCP20142 388 aa27.99■■■□□ 2.07
LDB1-204ENST00000490751 CRYGSP22914 178 aa27.99■■■□□ 2.07
LDB1-204ENST00000490751 SESN3P58005 492 aa27.99■■■□□ 2.07
LDB1-204ENST00000490751 KEAP1Q14145 624 aa27.99■■■□□ 2.07
LDB1-204ENST00000490751 RNPS1Q15287 305 aaKnown RBP27.99■■■□□ 2.07
LDB1-204ENST00000490751 C3orf33Q6P1S2 294 aa27.99■■■□□ 2.07
LDB1-204ENST00000490751 PNPT1Q8TCS8 783 aaKnown RBP27.99■■■□□ 2.07
LDB1-204ENST00000490751 TMEM234Q8WY98 164 aa27.99■■■□□ 2.07
LDB1-204ENST00000490751 ZC3HAV1LQ96H79 300 aaKnown RBP27.99■■■□□ 2.07
LDB1-204ENST00000490751 PRRC2AP48634 2157 aaKnown RBP27.99■■■□□ 2.07
LDB1-204ENST00000490751 A0A1W2PNR3 127 aa27.98■■■□□ 2.07
LDB1-204ENST00000490751 DEFB108AA8MXU0 73 aa27.98■■■□□ 2.07
LDB1-204ENST00000490751 ANXA11P50995 505 aaKnown RBP27.98■■■□□ 2.07
LDB1-204ENST00000490751 SYPL1Q16563 259 aa27.98■■■□□ 2.07
LDB1-204ENST00000490751 DNAJC14Q6Y2X3 702 aaPredicted RBP27.98■■■□□ 2.07
LDB1-204ENST00000490751 FCRLAQ7L513 359 aa27.98■■■□□ 2.07
LDB1-204ENST00000490751 STK32CQ86UX6 486 aa27.98■■■□□ 2.07
LDB1-204ENST00000490751 ANKFN1Q8N957 763 aa27.98■■■□□ 2.07
LDB1-204ENST00000490751 MBD6Q96DN6 1003 aa27.98■■■□□ 2.07
LDB1-204ENST00000490751 LIPT1Q9Y234 373 aa27.98■■■□□ 2.07
LDB1-204ENST00000490751 RFXANKO14593 260 aa27.97■■■□□ 2.07
LDB1-204ENST00000490751 IL6P05231 212 aa27.97■■■□□ 2.07
LDB1-204ENST00000490751 TXNL4AP83876 142 aaKnown RBP27.97■■■□□ 2.07
LDB1-204ENST00000490751 MERTKQ12866 999 aa27.97■■■□□ 2.07
LDB1-204ENST00000490751 GSTA3Q16772 222 aa27.97■■■□□ 2.07
LDB1-204ENST00000490751 TMEM201Q5SNT2 666 aa27.97■■■□□ 2.07
LDB1-204ENST00000490751 BEND4Q6ZU67 534 aa27.97■■■□□ 2.07
LDB1-204ENST00000490751 C22orf34Q6ZV56 151 aa27.97■■■□□ 2.07
LDB1-204ENST00000490751 PIK3IP1Q96FE7 263 aa27.97■■■□□ 2.07
LDB1-204ENST00000490751 TRNT1Q96Q11 434 aaKnown RBP27.97■■■□□ 2.07
LDB1-204ENST00000490751 ALPK1Q96QP1 1244 aa27.97■■■□□ 2.07
LDB1-204ENST00000490751 ST6GALNAC1Q9NSC7 600 aaPredicted RBP27.97■■■□□ 2.07
LDB1-204ENST00000490751 ACER3Q9NUN7 267 aa27.97■■■□□ 2.07
LDB1-204ENST00000490751 ZIM2Q9NZV7 527 aa27.97■■■□□ 2.07
LDB1-204ENST00000490751 KLHL13Q9P2N7 655 aa27.97■■■□□ 2.07
LDB1-204ENST00000490751 DIAPH2O60879 1101 aa27.96■■■□□ 2.07
LDB1-204ENST00000490751 RAC3P60763 192 aa27.96■■■□□ 2.07
LDB1-204ENST00000490751 COX20Q5RI15 118 aa27.96■■■□□ 2.07
LDB1-204ENST00000490751 STAC2Q6ZMT1 411 aa27.96■■■□□ 2.07
LDB1-204ENST00000490751 PLEKHM3Q6ZWE6 761 aa27.96■■■□□ 2.07
LDB1-204ENST00000490751 TUSC5Q8IXB3 177 aa27.96■■■□□ 2.07
LDB1-204ENST00000490751 OR5B2Q96R09 309 aa27.96■■■□□ 2.07
LDB1-204ENST00000490751 SLC38A1Q9H2H9 487 aa27.96■■■□□ 2.07
LDB1-204ENST00000490751 FANCFQ9NPI8 374 aa27.96■■■□□ 2.07
LDB1-204ENST00000490751 SDR39U1Q9NRG7 319 aaPredicted RBP27.96■■■□□ 2.07
LDB1-204ENST00000490751 SERINC1Q9NRX5 453 aa27.96■■■□□ 2.07
LDB1-204ENST00000490751 USH1CQ9Y6N9 552 aa27.96■■■□□ 2.07
LDB1-204ENST00000490751 IGHV3-15A0A0B4J1V0 119 aa27.95■■■□□ 2.06
LDB1-204ENST00000490751 CLDN24A6NM45 220 aa27.95■■■□□ 2.06
LDB1-204ENST00000490751 UBDO15205 165 aa27.95■■■□□ 2.06
LDB1-204ENST00000490751 PRKD3O94806 890 aa27.95■■■□□ 2.06
LDB1-204ENST00000490751 CHRM4P08173 479 aa27.95■■■□□ 2.06
LDB1-204ENST00000490751 ENPP1P22413 925 aa27.95■■■□□ 2.06
LDB1-204ENST00000490751 RYKP34925 604 aa27.95■■■□□ 2.06
LDB1-204ENST00000490751 KCNJ10P78508 379 aa27.95■■■□□ 2.06
LDB1-204ENST00000490751 PLAURQ03405 335 aa27.95■■■□□ 2.06
LDB1-204ENST00000490751 ZNF563Q8TA94 476 aa27.95■■■□□ 2.06
LDB1-204ENST00000490751 SLC6A13Q9NSD5 602 aa27.95■■■□□ 2.06
LDB1-204ENST00000490751 ITPR3Q14573 2671 aa27.95■■■□□ 2.06
LDB1-204ENST00000490751 KRT75O95678 551 aa27.94■■■□□ 2.06
LDB1-204ENST00000490751 DEFB113Q30KQ7 82 aa27.94■■■□□ 2.06
LDB1-204ENST00000490751 LRRC74BQ6ZQY2 392 aa27.94■■■□□ 2.06
LDB1-204ENST00000490751 NUFIP2Q7Z417 695 aaKnown RBP27.94■■■□□ 2.06
LDB1-204ENST00000490751 SLC43A2Q8N370 569 aa27.94■■■□□ 2.06
LDB1-204ENST00000490751 OR9I1Q8NGQ6 314 aa27.94■■■□□ 2.06
LDB1-204ENST00000490751 GP6Q9HCN6 339 aa27.94■■■□□ 2.06
LDB1-204ENST00000490751 EXOSC3Q9NQT5 275 aaKnown RBP27.94■■■□□ 2.06
LDB1-204ENST00000490751 PPP3CBP16298 524 aa27.93■■■□□ 2.06
LDB1-204ENST00000490751 ARFGAP2Q8N6H7 521 aa27.93■■■□□ 2.06
LDB1-204ENST00000490751 ATP6V1G3Q96LB4 118 aa27.93■■■□□ 2.06
LDB1-204ENST00000490751 C7orf26Q96N11 449 aa27.93■■■□□ 2.06
LDB1-204ENST00000490751 AGAP5A6NIR3 686 aa27.92■■■□□ 2.06
LDB1-204ENST00000490751 THBDP07204 575 aa27.92■■■□□ 2.06
LDB1-204ENST00000490751 NR2F1P10589 423 aa27.92■■■□□ 2.06
LDB1-204ENST00000490751 POLR2JP52435 117 aaKnown RBP27.92■■■□□ 2.06
LDB1-204ENST00000490751 SYT14P1Q58G82 188 aa27.92■■■□□ 2.06
LDB1-204ENST00000490751 EPGNQ6UW88 154 aa27.92■■■□□ 2.06
LDB1-204ENST00000490751 TFAP2EQ6VUC0 442 aa27.92■■■□□ 2.06
LDB1-204ENST00000490751 MIER2Q8N344 545 aa27.92■■■□□ 2.06
LDB1-204ENST00000490751 LRRC8CQ8TDW0 803 aa27.92■■■□□ 2.06
LDB1-204ENST00000490751 SLC25A43Q8WUT9 341 aaPredicted RBP27.92■■■□□ 2.06
LDB1-204ENST00000490751 CNOT9Q92600 299 aaKnown RBP27.92■■■□□ 2.06
LDB1-204ENST00000490751 RMND5AQ9H871 391 aa27.92■■■□□ 2.06
LDB1-204ENST00000490751 CTPS2Q9NRF8 586 aa27.92■■■□□ 2.06
LDB1-204ENST00000490751 KLHL9Q9P2J3 617 aa27.92■■■□□ 2.06
LDB1-204ENST00000490751 SMAD9O15198 467 aaKnown RBP27.91■■■□□ 2.06
LDB1-204ENST00000490751 ANP32DO95626 131 aa27.91■■■□□ 2.06
LDB1-204ENST00000490751 YES1P07947 543 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms