RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 E9PQ18 207 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 NUDT14O95848 222 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 PTNP21246 168 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 EPHA2P29317 976 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 CASP3P42574 277 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 GSSP48637 474 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 TPD52P55327 224 aaPredicted RBP19.74■□□□□ 0.75
SMC4-221ENST00000489573 SUMO3P55854 103 aaPredicted RBP19.74■□□□□ 0.75
SMC4-221ENST00000489573 FOXC1Q12948 553 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 TSPAN31Q12999 210 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 UGT2A3Q6UWM9 527 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 LINC00114Q6XXX2 140 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 C8orf59Q8N0T1 100 aaPredicted RBP19.74■□□□□ 0.75
SMC4-221ENST00000489573 MUS81Q96NY9 551 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 PITX2Q99697 317 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 GPA33Q99795 319 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 KLK13Q9UKR3 277 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 NDRG4Q9ULP0 352 aaKnown RBP19.74■□□□□ 0.75
SMC4-221ENST00000489573 PCDHGB5Q9Y5G0 923 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 GMPPBQ9Y5P6 360 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 A0A087WUJ7 227 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 C2orf72A6NCS6 295 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 PNMTP11086 282 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 FPR3P25089 353 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 MST1P26927 711 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 SLC1A3P43003 542 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 RPS6KA3P51812 740 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 ALDH6A1Q02252 535 aaKnown RBP19.74■□□□□ 0.75
SMC4-221ENST00000489573 SNTA1Q13424 505 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 ATP1A1-AS1Q5TC04 95 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 ZNF691Q5VV52 312 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 TTC33Q6PID6 262 aaPredicted RBP19.74■□□□□ 0.75
SMC4-221ENST00000489573 CLEC1AQ8NC01 280 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 PFN4Q8NHR9 129 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 CNIH4Q9P003 139 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 TMEM5Q9Y2B1 443 aa19.74■□□□□ 0.75
SMC4-221ENST00000489573 ANKUB1A6NFN9 424 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 KPNA4O00629 521 aaPredicted RBP19.73■□□□□ 0.75
SMC4-221ENST00000489573 KLF4O43474 513 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 ITGA3P26006 1051 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 MSX1P28360 303 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 GPR4P46093 362 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 CHN2P52757 468 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 CRISP1P54107 249 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 PRKCDQ05655 676 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 SRSF6Q13247 344 aaKnown RBP19.73■□□□□ 0.75
SMC4-221ENST00000489573 CLN3Q13286 438 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 SLC30A6Q6NXT4 461 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 ATG4DQ86TL0 474 aaPredicted RBP19.73■□□□□ 0.75
SMC4-221ENST00000489573 MEX3DQ86XN8 651 aaKnown RBP19.73■□□□□ 0.75
SMC4-221ENST00000489573 GPALPP1Q8IXQ4 340 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 SETD9Q8NE22 299 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 GPR119Q8TDV5 335 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 PAQR8Q8TEZ7 354 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 THAP4Q8WY91 577 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 ZNF524Q96C55 264 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 HRASLS5Q96KN8 279 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 LHPPQ9H008 270 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 C12orf10Q9HB07 376 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 CPNE5Q9HCH3 593 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 SH2D2AQ9NP31 389 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 PNPLA3Q9NST1 481 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 TEKT2Q9UIF3 430 aa19.73■□□□□ 0.75
SMC4-221ENST00000489573 WDFY3Q8IZQ1 3526 aa19.72■□□□□ 0.75
SMC4-221ENST00000489573 HEATR5AQ86XA9 2040 aa19.72■□□□□ 0.75
SMC4-221ENST00000489573 IGLV3-32A0A0A0MS00 114 aa19.72■□□□□ 0.75
SMC4-221ENST00000489573 ELOA3DA6NLF2 546 aaPredicted RBP19.72■□□□□ 0.75
SMC4-221ENST00000489573 GNB5O14775 395 aa19.72■□□□□ 0.75
SMC4-221ENST00000489573 GP1BBP13224 206 aa19.72■□□□□ 0.75
SMC4-221ENST00000489573 IFI30P13284 250 aa19.72■□□□□ 0.75
SMC4-221ENST00000489573 CHMP24386 653 aa19.72■□□□□ 0.75
SMC4-221ENST00000489573 CTBP2P56545 445 aa19.72■□□□□ 0.75
SMC4-221ENST00000489573 RAPSNQ13702 412 aa19.72■□□□□ 0.75
SMC4-221ENST00000489573 QPRTQ15274 297 aa19.72■□□□□ 0.75
SMC4-221ENST00000489573 TOMM34Q15785 309 aaPredicted RBP19.72■□□□□ 0.75
SMC4-221ENST00000489573 ELOA3BQ3SY89 546 aa19.72■□□□□ 0.75
SMC4-221ENST00000489573 ZNF468Q5VIY5 522 aaPredicted RBP19.72■□□□□ 0.75
SMC4-221ENST00000489573 PRAMEF20Q5VT98 475 aa19.72■□□□□ 0.75
SMC4-221ENST00000489573 OR5M10Q6IEU7 315 aa19.72■□□□□ 0.75
SMC4-221ENST00000489573 RTL4Q6ZR62 310 aa19.72■□□□□ 0.75
SMC4-221ENST00000489573 CDK20Q8IZL9 346 aa19.72■□□□□ 0.75
SMC4-221ENST00000489573 BEST3Q8N1M1 668 aa19.72■□□□□ 0.75
SMC4-221ENST00000489573 ELOA3Q8NG57 546 aa19.72■□□□□ 0.75
SMC4-221ENST00000489573 SGCZQ96LD1 299 aa19.72■□□□□ 0.75
SMC4-221ENST00000489573 ADAM19Q9H013 955 aa19.72■□□□□ 0.75
SMC4-221ENST00000489573 MEPEQ9NQ76 525 aaPredicted RBP19.72■□□□□ 0.75
SMC4-221ENST00000489573 TAS2R10Q9NYW0 307 aa19.72■□□□□ 0.75
SMC4-221ENST00000489573 CDC40O60508 579 aaKnown RBP eCLIP19.71■□□□□ 0.75
SMC4-221ENST00000489573 SOX14O95416 240 aa19.71■□□□□ 0.75
SMC4-221ENST00000489573 CCL3P10147 92 aa19.71■□□□□ 0.75
SMC4-221ENST00000489573 TACR3P29371 465 aa19.71■□□□□ 0.75
SMC4-221ENST00000489573 RRADP55042 308 aa19.71■□□□□ 0.75
SMC4-221ENST00000489573 SLC22A10Q63ZE4 541 aa19.71■□□□□ 0.75
SMC4-221ENST00000489573 Q6ZPB1 254 aaPredicted RBP19.71■□□□□ 0.75
SMC4-221ENST00000489573 RASSF6Q6ZTQ3 369 aa19.71■□□□□ 0.75
SMC4-221ENST00000489573 THAP5Q7Z6K1 395 aa19.71■□□□□ 0.75
SMC4-221ENST00000489573 LSRQ86X29 649 aaPredicted RBP19.71■□□□□ 0.75
SMC4-221ENST00000489573 GATA6Q92908 595 aa19.71■□□□□ 0.75
SMC4-221ENST00000489573 APOL4Q9BPW4 351 aa19.71■□□□□ 0.75
SMC4-221ENST00000489573 C20orf141Q9NUB4 165 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms