RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 SNRPBP14678 240 aaKnown RBP16.48■□□□□ 0.23
NPHP4-209ENST00000489180 SLC6A8P48029 635 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 SLC6A11P48066 632 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 CLDN12P56749 244 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 PKDCCQ504Y2 493 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 POLHQ9Y253 713 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 USP3Q9Y6I4 520 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 CITO14578 2027 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 GJA5P36382 358 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 PSPHP78330 225 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 RFLNAQ6ZTI6 216 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 BCDIN3DQ7Z5W3 292 aaKnown RBP16.48■□□□□ 0.23
NPHP4-209ENST00000489180 C12orf45Q8N5I9 185 aaPredicted RBP16.48■□□□□ 0.23
NPHP4-209ENST00000489180 UHRF1Q96T88 793 aaPredicted RBP16.48■□□□□ 0.23
NPHP4-209ENST00000489180 SLC46A2Q9BY10 475 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 COPS3Q9UNS2 423 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 A6NIZ1 184 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 CD79AP11912 226 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 PRLHRP49683 370 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 RAP1BP61224 184 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 RAP1AP62834 184 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 VASNQ6EMK4 673 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 FNDC9Q8TBE3 224 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 UNKLQ9H9P5 680 aaKnown RBP16.48■□□□□ 0.23
NPHP4-209ENST00000489180 A6NCN8 305 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 IFNA17P01571 189 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 IDH3GP51553 393 aaPredicted RBP16.47■□□□□ 0.23
NPHP4-209ENST00000489180 SORDQ00796 357 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 CHRNEQ04844 493 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 OR7E24Q6IFN5 339 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 TEX19Q8NA77 164 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 OLAHQ9NV23 265 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 ZNF337Q9Y3M9 751 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 RBMS1P29558 406 aaKnown RBP16.47■□□□□ 0.23
NPHP4-209ENST00000489180 DSC1Q08554 894 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 NFATC4Q14934 902 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 HNRNPA1L2Q32P51 320 aaKnown RBP16.47■□□□□ 0.23
NPHP4-209ENST00000489180 FAM83HQ6ZRV2 1179 aaPredicted RBP16.47■□□□□ 0.23
NPHP4-209ENST00000489180 GPR155Q7Z3F1 870 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 TECPR1Q7Z6L1 1165 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 RGPD2P0DJD1 1756 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 FZD7O75084 574 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 SLC10A3P09131 477 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 SERPINA2P20848 420 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 KCTD11Q693B1 232 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 METTL17Q9H7H0 456 aaPredicted RBP16.47■□□□□ 0.23
NPHP4-209ENST00000489180 ZNF334Q9HCZ1 680 aaPredicted RBP16.47■□□□□ 0.23
NPHP4-209ENST00000489180 CBLCQ9ULV8 474 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 CA5BQ9Y2D0 317 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 ADAM12O43184 909 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 DNAJB6O75190 326 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 TPT1P13693 172 aaKnown RBP16.47■□□□□ 0.23
NPHP4-209ENST00000489180 APEHP13798 732 aaKnown RBP16.47■□□□□ 0.23
NPHP4-209ENST00000489180 GIPRP48546 466 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 PXNP49023 591 aaPredicted RBP16.47■□□□□ 0.23
NPHP4-209ENST00000489180 HTR3DQ70Z44 454 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 ISG20Q96AZ6 181 aaKnown RBP16.47■□□□□ 0.23
NPHP4-209ENST00000489180 SDSLQ96GA7 329 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 TRMT2BQ96GJ1 504 aaKnown RBP16.47■□□□□ 0.23
NPHP4-209ENST00000489180 HRH4Q9H3N8 390 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 IFNA4P05014 189 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 FOXK1P85037 733 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 UBE2NLQ5JXB2 153 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 CELF2-AS1Q8N7Q2 184 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 FRZBQ92765 325 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 PRRT1Q99946 306 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 PLEK2Q9NYT0 353 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 OSGIN1Q9UJX0 560 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 ZNF225Q9UK10 706 aa16.47■□□□□ 0.23
NPHP4-209ENST00000489180 ANKRD33BA6NCL7 494 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 H7C1C5 153 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 AIFM1O95831 613 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 ARAFP10398 606 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 CPMP14384 443 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 LCN6P62502 163 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 STEAP3Q658P3 488 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 METAP1DQ6UB28 335 aaPredicted RBP16.46■□□□□ 0.23
NPHP4-209ENST00000489180 LIX1LQ8IVB5 337 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 CMTM1Q8IZ96 169 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 OR7G1Q8NGA0 311 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 ADAMTS14Q8WXS8 1223 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 NUDT22Q9BRQ3 303 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 ELOVL3Q9HB03 270 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 ACOD1A6NK06 481 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 ZBTB42B2RXF5 422 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 HLA-AP01891 365 aaKnown RBP16.46■□□□□ 0.23
NPHP4-209ENST00000489180 DBHP09172 617 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 KIR2DS3Q14952 304 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 BATFQ16520 125 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 MRPL2Q5T653 305 aaKnown RBP16.46■□□□□ 0.23
NPHP4-209ENST00000489180 C18orf63Q68DL7 685 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 MCATQ8IVS2 390 aaKnown RBP16.46■□□□□ 0.23
NPHP4-209ENST00000489180 OR5D14Q8NGL3 314 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 HHIPL1Q96JK4 782 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 VRK1Q99986 396 aaPredicted RBP16.46■□□□□ 0.23
NPHP4-209ENST00000489180 SULT2B1O00204 365 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 HOXB5P09067 269 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 TAS2R20P59543 309 aa16.46■□□□□ 0.23
NPHP4-209ENST00000489180 RPS15P62841 145 aaKnown RBP16.46■□□□□ 0.23
NPHP4-209ENST00000489180 AGAP7PQ5VUJ5 663 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms