RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 CHMP24386 653 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 ELK4P28324 431 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 SHC1P29353 583 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 SLC6A8P48029 635 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 IDH2P48735 452 aaKnown RBP9.97□□□□□ -0.81
UBE4B-210ENST00000488228 MNAT1P51948 309 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 CASP6P55212 293 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 CLDN20P56880 219 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 RGS8P57771 180 aaPredicted RBP9.97□□□□□ -0.81
UBE4B-210ENST00000488228 SESN3P58005 492 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 CBX1P83916 185 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 MERTKQ12866 999 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 VEZF1Q14119 521 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 GXYLT1Q4G148 440 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 ENPP6Q6UWR7 440 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 PLXDC2Q6UX71 529 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 CCDC80Q76M96 950 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 GGNQ86UU5 652 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 GRAMD2AQ8IUY3 354 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 ULK2Q8IYT8 1036 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 CADM2Q8N3J6 435 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 MARVELD2Q8N4S9 558 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 OR10Q1Q8NGQ4 319 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 VANGL1Q8TAA9 524 aaPredicted RBP9.97□□□□□ -0.81
UBE4B-210ENST00000488228 ST8SIA1Q92185 356 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 WDYHV1Q96HA8 205 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 MRGPRX4Q96LA9 322 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 PINK1Q9BXM7 581 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 PRDM14Q9GZV8 571 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 TP63Q9H3D4 680 aaPredicted RBP9.97□□□□□ -0.81
UBE4B-210ENST00000488228 NDE1Q9NXR1 346 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 ALKBH4Q9NXW9 302 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 EGFL7Q9UHF1 273 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 ERRFI1Q9UJM3 462 aaPredicted RBP9.97□□□□□ -0.81
UBE4B-210ENST00000488228 SLC13A4Q9UKG4 626 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 ZNF232Q9UNY5 417 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 FAM215AQ9Y5M1 114 aa9.97□□□□□ -0.81
UBE4B-210ENST00000488228 BAHCC1Q9P281 2608 aa9.96□□□□□ -0.81
UBE4B-210ENST00000488228 ETV2O00321 342 aaPredicted RBP9.96□□□□□ -0.82
UBE4B-210ENST00000488228 CCL21O00585 134 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 EFNA2O43921 213 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 PDE5AO76074 875 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 RNF224P0DH78 156 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 GP1BBP13224 206 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 UQCRBP14927 111 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 TNFRSF1BP20333 461 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 ACVR2AP27037 513 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 HTR2AP28223 471 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 SFTPDP35247 375 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 MSX2P35548 267 aaPredicted RBP9.96□□□□□ -0.82
UBE4B-210ENST00000488228 EIF1P41567 113 aaKnown RBP9.96□□□□□ -0.82
UBE4B-210ENST00000488228 ACAA2P42765 397 aaKnown RBP9.96□□□□□ -0.82
UBE4B-210ENST00000488228 ZNF136P52737 540 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 SUCLG1P53597 346 aaKnown RBP9.96□□□□□ -0.82
UBE4B-210ENST00000488228 SRSF1Q07955 248 aaKnown RBP eCLIP9.96□□□□□ -0.82
UBE4B-210ENST00000488228 CEACAM7Q14002 265 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 DUSP7Q16829 419 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.96□□□□□ -0.824e-6■□□□□ 10.9
UBE4B-210ENST00000488228 GLYR1Q49A26 553 aaPredicted RBP9.96□□□□□ -0.82
UBE4B-210ENST00000488228 ACSF3Q4G176 576 aaPredicted RBP9.96□□□□□ -0.82
UBE4B-210ENST00000488228 C4orf17Q53FE4 359 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 CYBRD1Q53TN4 286 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 SLC25A53Q5H9E4 307 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 C1orf185Q5T7R7 199 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 RTL6Q6ICC9 239 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 PLEKHM3Q6ZWE6 761 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 ZNF550Q7Z398 422 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 LACC1Q8IV20 430 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 ZNF440Q8IYI8 595 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 ATP6V1C2Q8NEY4 427 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 OR4D11Q8NGI4 311 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 SLC26A7Q8TE54 656 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 TMEM234Q8WY98 164 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 CDRT15Q96T59 188 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 ARHGDIGQ99819 225 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 TUBA1CQ9BQE3 449 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 PRR14Q9BWN1 585 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 ARMC7Q9H6L4 198 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 CTPS2Q9NRF8 586 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 ACER3Q9NUN7 267 aa9.96□□□□□ -0.82
UBE4B-210ENST00000488228 USP9YO00507 2555 aaPredicted RBP9.95□□□□□ -0.82
UBE4B-210ENST00000488228 CLCA1A8K7I4 914 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 TMEM229AB2RXF0 380 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 SYT5O00445 386 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 FAAHO00519 579 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 EIF1AYO14602 144 aaKnown RBP9.95□□□□□ -0.82
UBE4B-210ENST00000488228 WDR1O75083 606 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 FESP07332 822 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 HSD17B1P14061 328 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 GGT1P19440 569 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 CCNA2P20248 432 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 ME2P23368 584 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 TACR3P29371 465 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 KCNJ5P48544 419 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 CLDN15P56746 228 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 NCALDP61601 193 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 SELENBP1Q13228 472 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 NPTX1Q15818 432 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 NRF1Q16656 503 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 ZSWIM7Q19AV6 140 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms