RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 C4orf47A7E2U8 309 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 TMEM150CB9EJG8 249 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 OSMP13725 252 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 SLC6A1P30531 599 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 RPS25P62851 125 aaKnown RBP12.7□□□□□ -0.38
COPS7B-221ENST00000488111 RBBP4Q09028 425 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 EXOSC2Q13868 293 aaKnown RBP12.7□□□□□ -0.38
COPS7B-221ENST00000488111 RUNX2Q13950 521 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 TM9SF4Q92544 642 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 PHF21AQ96BD5 680 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 PPCDCQ96CD2 204 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 TMEM9BQ9NQ34 198 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 YARS2Q9Y2Z4 477 aaKnown RBP12.7□□□□□ -0.38
COPS7B-221ENST00000488111 ENPP4Q9Y6X5 453 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 GTPBP1O00178 669 aaKnown RBP12.69□□□□□ -0.38
COPS7B-221ENST00000488111 AKAP8O43823 692 aaKnown RBP12.69□□□□□ -0.38
COPS7B-221ENST00000488111 PPM1BO75688 479 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 MVDP53602 400 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 CAV3P56539 151 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 ILKQ13418 452 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 SQSTM1Q13501 440 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 HEPACAMQ14CZ8 416 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 OCLNQ16625 522 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 MPEG1Q2M385 716 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 PRTGQ2VWP7 1150 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 PLA1AQ53H76 456 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 MRM1Q6IN84 353 aaKnown RBP12.69□□□□□ -0.38
COPS7B-221ENST00000488111 TMEM81Q6P7N7 255 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 CEACAM20Q6UY09 585 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 WDR53Q7Z5U6 358 aaPredicted RBP12.69□□□□□ -0.38
COPS7B-221ENST00000488111 LAPTM4BQ86VI4 370 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 D2HGDHQ8N465 521 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 METTL27Q8N6F8 245 aaPredicted RBP12.69□□□□□ -0.38
COPS7B-221ENST00000488111 OR11H7Q8NGC8 314 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 OR4A15Q8NGL6 344 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 OR9A4Q8NGU2 314 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 SLC41A2Q96JW4 573 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 CCDC74BQ96LY2 380 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 ATF6BQ99941 703 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 UBQLN2Q9UHD9 624 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 ATP6V1HQ9UI12 483 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 SPIN1Q9Y657 262 aaPredicted RBP12.69□□□□□ -0.38
COPS7B-221ENST00000488111 A0A0A6YYC8 382 aaPredicted RBP12.69□□□□□ -0.38
COPS7B-221ENST00000488111 I3L1I5 382 aaPredicted RBP12.69□□□□□ -0.38
COPS7B-221ENST00000488111 PGRMC2O15173 223 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 ADAP00813 363 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 CFL1P23528 166 aaKnown RBP12.69□□□□□ -0.38
COPS7B-221ENST00000488111 INPP1P49441 399 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 GBX2P52951 348 aaPredicted RBP12.69□□□□□ -0.38
COPS7B-221ENST00000488111 TPBGQ13641 420 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 MANEAQ5SRI9 462 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 PHF19Q5T6S3 580 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 NAXDQ8IW45 347 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 OR4D9Q8NGE8 314 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 OR52I1Q8NGK6 324 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 RBPMSQ93062 196 aaKnown RBP12.69□□□□□ -0.38
COPS7B-221ENST00000488111 EXOSC8Q96B26 276 aaKnown RBP12.69□□□□□ -0.38
COPS7B-221ENST00000488111 SCMH1Q96GD3 660 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 GHITMQ9H3K2 345 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 ZNF768Q9H5H4 540 aaKnown RBP12.69□□□□□ -0.38
COPS7B-221ENST00000488111 GPATCH2Q9NW75 528 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 SEMA5BQ9P283 1151 aa12.69□□□□□ -0.38
COPS7B-221ENST00000488111 SPTBP11277 2137 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 SLC30A4O14863 429 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 B3GALT2O43825 422 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 MPC2O95563 127 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 RAB36O95755 333 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 IFNA16P05015 189 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 RHCEP18577 417 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 STOMP27105 288 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 FGF9P31371 208 aaPredicted RBP12.68□□□□□ -0.38
COPS7B-221ENST00000488111 ETV5P41161 510 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 TSFMP43897 325 aaKnown RBP12.68□□□□□ -0.38
COPS7B-221ENST00000488111 ETV1P50549 477 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 PDE7AQ13946 482 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 SCARB2Q14108 478 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 DSG2Q14126 1118 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 GPR176Q14439 515 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 GANABQ14697 944 aaKnown RBP12.68□□□□□ -0.38
COPS7B-221ENST00000488111 GCNT6Q5T4J0 391 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 ZNF57Q68EA5 555 aaPredicted RBP12.68□□□□□ -0.38
COPS7B-221ENST00000488111 IKBIPQ70UQ0 350 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 CAMKMTQ7Z624 323 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 CARFQ8N187 725 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 ARHGEF39Q8N4T4 335 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 OR8J1Q8NGP2 316 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 OR1L3Q8NH93 324 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 HGDQ93099 445 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 SENP5Q96HI0 755 aaPredicted RBP12.68□□□□□ -0.38
COPS7B-221ENST00000488111 C10orf90Q96M02 699 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 KLHL15Q96M94 604 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 SERINC2Q96SA4 455 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 PRRX2Q99811 253 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 DPCDQ9BVM2 203 aaPredicted RBP12.68□□□□□ -0.38
COPS7B-221ENST00000488111 ISYNA1Q9NPH2 558 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 ZNF282Q9UDV7 671 aaPredicted RBP12.68□□□□□ -0.38
COPS7B-221ENST00000488111 KCND3Q9UK17 655 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 GSTK1Q9Y2Q3 226 aa12.68□□□□□ -0.38
COPS7B-221ENST00000488111 GALR3O60755 368 aaPredicted RBP12.67□□□□□ -0.38
COPS7B-221ENST00000488111 RDH16O75452 317 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms