RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SLC9A8Q9Y2E8 581 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 C15orf41Q9Y2V0 281 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 CNTRLQ7Z7A1 2325 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 FAM166BA8MTA8 275 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 SHISA8B8ZZ34 492 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 ZIC3O60481 467 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 CBR3O75828 277 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 WISP2O76076 250 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 DIRAS1O95057 198 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 AGFG2O95081 481 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 THY1P04216 161 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 IFNW1P05000 195 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 ELAVL4P26378 380 aaKnown RBP11.59□□□□□ -0.55
HDAC6-229ENST00000486665 MST1P26927 711 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 SLC6A8P48029 635 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 PPIAP62937 165 aaKnown RBP11.59□□□□□ -0.55
HDAC6-229ENST00000486665 PLGLB1Q02325 96 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 CHRNB3Q05901 458 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 CBFBQ13951 182 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 QPRTQ15274 297 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 OR1Q1Q15612 314 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 HYAL4Q2M3T9 481 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 FAM98BQ52LJ0 330 aaKnown RBP11.59□□□□□ -0.55
HDAC6-229ENST00000486665 RPUSD3Q6P087 351 aaKnown RBP11.59□□□□□ -0.55
HDAC6-229ENST00000486665 DEF8Q6ZN54 512 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 TMEM251Q8N6I4 163 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 Q8NA96 180 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 GALNT11Q8NCW6 608 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 PAPD5Q8NDF8 572 aaKnown RBP11.59□□□□□ -0.55
HDAC6-229ENST00000486665 POC1BQ8TC44 478 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 DUS3LQ96G46 650 aaKnown RBP11.59□□□□□ -0.55
HDAC6-229ENST00000486665 TAAR6Q96RI8 345 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 CHID1Q9BWS9 393 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 UBQLN3Q9H347 655 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 IL1RAPQ9NPH3 570 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 MED17Q9NVC6 651 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 A4GNTQ9UNA3 340 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 ENPP4Q9Y6X5 453 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 NINQ8N4C6 2090 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 DOPEY1Q5JWR5 2465 aa11.59□□□□□ -0.55
HDAC6-229ENST00000486665 A1L4Q6 167 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 CPSF4LA6NMK7 179 aaKnown RBP11.58□□□□□ -0.56
HDAC6-229ENST00000486665 FAAHO00519 579 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 FFAR1O14842 300 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 FMO6PO60774 539 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 FKBP6O75344 327 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 LYPD3O95274 346 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 RASAL1O95294 804 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 NUDT14O95848 222 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 FABP3P05413 133 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 CELA3AP09093 270 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 RAP2AP10114 183 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 PGCP20142 388 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 TCEA1P23193 301 aaKnown RBP11.58□□□□□ -0.56
HDAC6-229ENST00000486665 PSMA4P25789 261 aaKnown RBP11.58□□□□□ -0.56
HDAC6-229ENST00000486665 DPP4P27487 766 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 COL8A1P27658 744 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 SLC7A1P30825 629 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 MAGEA2P43356 314 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 SUMO3P55854 103 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-229ENST00000486665 DSCR4P56555 118 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-229ENST00000486665 SESN3P58005 492 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 ELF3P78545 371 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-229ENST00000486665 MRPL49Q13405 166 aaKnown RBP11.58□□□□□ -0.56
HDAC6-229ENST00000486665 PIN1Q13526 163 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-229ENST00000486665 PLPPR5Q32ZL2 321 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 ENTPD8Q5MY95 495 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 PIWIL3Q7Z3Z3 882 aaKnown RBP11.58□□□□□ -0.56
HDAC6-229ENST00000486665 YRDCQ86U90 279 aaKnown RBP11.58□□□□□ -0.56
HDAC6-229ENST00000486665 ZDHHC21Q8IVQ6 265 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 CADM2Q8N3J6 435 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 OR5M1Q8NGP8 315 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 PYDC1Q8WXC3 89 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 POP5Q969H6 163 aaKnown RBP11.58□□□□□ -0.56
HDAC6-229ENST00000486665 PNPLA2Q96AD5 504 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 ZNF300Q96RE9 604 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-229ENST00000486665 ZNF559Q9BR84 538 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 TRIM2Q9C040 744 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 PTGES2Q9H7Z7 377 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 HHATLQ9HCP6 504 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 ACER3Q9NUN7 267 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 TAS2R10Q9NYW0 307 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 RHCGQ9UBD6 479 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 VDAC3Q9Y277 283 aa11.58□□□□□ -0.56
HDAC6-229ENST00000486665 PCNX3Q9H6A9 2034 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 A0A1B0GWA3 101 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 H3BNX3 289 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 TRAPPC6AO75865 159 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 PRSS23O95084 383 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 NTN1O95631 604 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 PRKCAP17252 672 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 HK1P19367 917 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 GDF1P27539 372 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 SRD5A2P31213 254 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 MAGEA5P43359 124 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 FOXD4Q12950 439 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-229ENST00000486665 TOMM20Q15388 145 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 TMEM44Q2T9K0 475 aa11.57□□□□□ -0.56
HDAC6-229ENST00000486665 EIF2S3LQ2VIR3 472 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms