RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 ZNF721Q8TF20 911 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 LCORQ96JN0 433 aaPredicted RBP18.71■□□□□ 0.59
HPS3-206ENST00000486530 ART5Q96L15 291 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 DPYSL5Q9BPU6 564 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 TRAV27A0A087WT01 109 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 SOCS6O14544 535 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 TSPAN19P0C672 248 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 FOXK2Q01167 660 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 CRYZQ08257 329 aaKnown RBP18.71■□□□□ 0.59
HPS3-206ENST00000486530 NDUFAF6Q330K2 333 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 ARMC4Q5T2S8 1044 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 OR2G6Q5TZ20 316 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 NIPAL3Q6P499 406 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 PLBD1Q6P4A8 553 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 TMEM71Q6P5X7 295 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 LAPTM4BQ86VI4 370 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 PIGKQ92643 395 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 LMF1Q96S06 567 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 C6orf62Q9GZU0 229 aaPredicted RBP18.71■□□□□ 0.59
HPS3-206ENST00000486530 ENKD1Q9H0I2 346 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 NXF5Q9H1B4 397 aaKnown RBP18.71■□□□□ 0.59
HPS3-206ENST00000486530 MKKSQ9NPJ1 570 aaPredicted RBP18.71■□□□□ 0.59
HPS3-206ENST00000486530 FSCN3Q9NQT6 498 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 SSR3Q9UNL2 185 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 SPIN1Q9Y657 262 aaPredicted RBP18.71■□□□□ 0.59
HPS3-206ENST00000486530 PI4KAP42356 2102 aa18.7■□□□□ 0.58
HPS3-206ENST00000486530 LAMA1P25391 3075 aa18.7■□□□□ 0.58
HPS3-206ENST00000486530 A0A1B0GTQ1 180 aa18.7■□□□□ 0.58
HPS3-206ENST00000486530 SYNDIG1LA6NDD5 238 aa18.7■□□□□ 0.58
HPS3-206ENST00000486530 FAM183AA6NL82 134 aa18.7■□□□□ 0.58
HPS3-206ENST00000486530 HPGDP15428 266 aa18.7■□□□□ 0.58
HPS3-206ENST00000486530 DCAF7P61962 342 aa18.7■□□□□ 0.58
HPS3-206ENST00000486530 ITGADQ13349 1161 aa18.7■□□□□ 0.58
HPS3-206ENST00000486530 NR0B2Q15466 257 aa18.7■□□□□ 0.58
HPS3-206ENST00000486530 RGS21Q2M5E4 152 aa18.7■□□□□ 0.58
HPS3-206ENST00000486530 FNDC7Q5VTL7 733 aa18.7■□□□□ 0.58
HPS3-206ENST00000486530 BTLAQ7Z6A9 289 aa18.7■□□□□ 0.58
HPS3-206ENST00000486530 OR4F15Q8NGB8 312 aa18.7■□□□□ 0.58
HPS3-206ENST00000486530 OR14A16Q8NHC5 309 aa18.7■□□□□ 0.58
HPS3-206ENST00000486530 DAZLQ92904 295 aaKnown RBP18.7■□□□□ 0.58
HPS3-206ENST00000486530 CCNL2Q96S94 520 aaPredicted RBP18.7■□□□□ 0.58
HPS3-206ENST00000486530 ARHGAP9Q9BRR9 750 aa18.7■□□□□ 0.58
HPS3-206ENST00000486530 SIAEQ9HAT2 523 aa18.7■□□□□ 0.58
HPS3-206ENST00000486530 SRPK3Q9UPE1 567 aa18.7■□□□□ 0.58
HPS3-206ENST00000486530 hCG_2014768A0A024R1R8 64 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 A0A087WUJ7 227 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 ZNF670-ZNF695F2Z2N8 137 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 SCDO00767 359 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 PAICSP22234 425 aaKnown RBP18.69■□□□□ 0.58
HPS3-206ENST00000486530 SLC6A6P31641 620 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 ATP6V1E1P36543 226 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 SQSTM1Q13501 440 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 TPBGQ13641 420 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 VWA2Q5GFL6 755 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 SLC35F1Q5T1Q4 408 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 C1orf189Q5VU69 101 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 TUBA3EQ6PEY2 450 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 RTL4Q6ZR62 310 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 MEPCEQ7L2J0 689 aaKnown RBP18.69■□□□□ 0.58
HPS3-206ENST00000486530 LSRQ86X29 649 aaPredicted RBP18.69■□□□□ 0.58
HPS3-206ENST00000486530 GATAD2AQ86YP4 633 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 KLHL36Q8N4N3 616 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 TMEM105Q8N8V8 129 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 OR51A7Q8NH64 312 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 OR4C6Q8NH72 309 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 UFD1Q92890 307 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 ADIPOR1Q96A54 375 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 OTULINQ96BN8 352 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 ASPNQ9BXN1 380 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 EXOSC3Q9NQT5 275 aaKnown RBP18.69■□□□□ 0.58
HPS3-206ENST00000486530 TNFRSF10DQ9UBN6 386 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 SEC16AO15027 2179 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 TMEM221A6NGB7 291 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 RIIAD1A6NNX1 92 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 M0R296 226 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 WWP2O00308 870 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 SULT1C4O75897 302 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 LCN1P31025 176 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 S100A5P33763 92 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 NSDHLQ15738 373 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 HLA-BQ31612 363 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 PEAR1Q5VY43 1037 aaPredicted RBP18.69■□□□□ 0.58
HPS3-206ENST00000486530 ZNF485Q8NCK3 441 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 OR52N1Q8NH53 320 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 SAP25Q8TEE9 199 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 CHPT1Q8WUD6 406 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 GATAD2BQ8WXI9 593 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 TM9SF4Q92544 642 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 SGTBQ96EQ0 304 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 ZC3H10Q96K80 434 aaKnown RBP18.69■□□□□ 0.58
HPS3-206ENST00000486530 PHOX2BQ99453 314 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 MCCC2Q9HCC0 563 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 ICAM5Q9UMF0 924 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 PEX16Q9Y5Y5 336 aa18.69■□□□□ 0.58
HPS3-206ENST00000486530 PRR23D1E9PI22 279 aaPredicted RBP18.68■□□□□ 0.58
HPS3-206ENST00000486530 TAF4O00268 1085 aa18.68■□□□□ 0.58
HPS3-206ENST00000486530 PPM1BO75688 479 aa18.68■□□□□ 0.58
HPS3-206ENST00000486530 UTS2O95399 124 aa18.68■□□□□ 0.58
HPS3-206ENST00000486530 PRR23D2P0DMB1 279 aaPredicted RBP18.68■□□□□ 0.58
HPS3-206ENST00000486530 UBL4AP11441 157 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms