RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 DMWDQ09019 674 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 MLLT11Q13015 90 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-228ENST00000486227 CCDC58Q4VC31 144 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 ENTPD8Q5MY95 495 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 HAGHLQ6PII5 290 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-228ENST00000486227 ZNF100Q8IYN0 542 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 WDR20Q8TBZ3 569 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 NEURL3Q96EH8 262 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 TCTN2Q96GX1 697 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 ZC3H10Q96K80 434 aaKnown RBP10.29□□□□□ -0.76
HDAC6-228ENST00000486227 SAP130Q9H0E3 1048 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 OR52A5Q9H2C5 316 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 RBFOX1Q9NWB1 397 aaKnown RBP10.29□□□□□ -0.76
HDAC6-228ENST00000486227 MGAT4CQ9UBM8 478 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 SEC14L5O43304 696 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 FOXK1P85037 733 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 TAGLNQ01995 201 aaKnown RBP10.28□□□□□ -0.76
HDAC6-228ENST00000486227 CLPPQ16740 277 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-228ENST00000486227 SWI5Q1ZZU3 235 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 LRIF1Q5T3J3 769 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 KDM4DQ6B0I6 523 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 GPALPP1Q8IXQ4 340 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 PDZD9Q8IXQ8 264 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 ENTHD1Q8IYW4 607 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 NLGN4XQ8N0W4 816 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 C19orf47Q8N9M1 422 aaKnown RBP10.28□□□□□ -0.76
HDAC6-228ENST00000486227 OR5T3Q8NGG3 340 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 OR14L1PQ8NHC6 308 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 CCL4L1Q8NHW4 92 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 YIPF6Q96EC8 236 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 BMFQ96LC9 184 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 C19orf43Q9BQ61 176 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 IKZF5Q9H5V7 419 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 GLTPQ9NZD2 209 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 LRIT2A6NDA9 550 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 RBMXL2O75526 392 aaKnown RBP10.28□□□□□ -0.76
HDAC6-228ENST00000486227 NDUFB2O95178 105 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 PDGFAP04085 211 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 E2F1Q01094 437 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 MRPL49Q13405 166 aaKnown RBP10.28□□□□□ -0.76
HDAC6-228ENST00000486227 POU4F3Q15319 338 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 COL28A1Q2UY09 1125 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 ZNF782Q6ZMW2 699 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-228ENST00000486227 LAX1Q8IWV1 398 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 RIMKLAQ8IXN7 391 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 SGCDQ92629 289 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 MRGPRX1Q96LB2 322 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 SGPP1Q9BX95 441 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 ULBP3Q9BZM4 244 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 B3GNT2Q9NY97 397 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 OSGIN1Q9UJX0 560 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 NEU3Q9UQ49 428 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 ALG5Q9Y673 324 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 TRBV2A0A0J9YWF9 115 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 FAM171A2A8MVW0 826 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 ETHE1O95571 254 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 FUT1P19526 365 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 EVI2BP34910 448 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 HTR3AP46098 478 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 GIPRP48546 466 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 ZNF84P51523 738 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 ADAM8P78325 824 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 KCNJ10P78508 379 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 SLC22A10Q63ZE4 541 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 PYHIN1Q6K0P9 492 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 LEG1Q6P5S2 330 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 METAP1DQ6UB28 335 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-228ENST00000486227 TMEM184AQ6ZMB5 413 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 BTLAQ7Z6A9 289 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 DTX3Q8N9I9 347 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 HAVCR1Q96D42 359 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 RPP25Q9BUL9 199 aaKnown RBP10.28□□□□□ -0.76
HDAC6-228ENST00000486227 C1QTNF2Q9BXJ5 285 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 OR51J1Q9H342 316 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 CHMP1AQ9HD42 196 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-228ENST00000486227 NUDT15Q9NV35 164 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 NUBP2Q9Y5Y2 271 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 ASCC3Q8N3C0 2202 aaKnown RBP10.28□□□□□ -0.76
HDAC6-228ENST00000486227 A0A0X1KG70 313 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 CDC14CA4D256 554 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 TNFRSF10CO14798 259 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 RRP8O43159 456 aaKnown RBP10.28□□□□□ -0.76
HDAC6-228ENST00000486227 FMO6PO60774 539 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 SCRG1O75711 98 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 GASTP01350 101 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 ACPPP15309 386 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 XAF1Q6GPH4 301 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 ZNF101Q8IZC7 436 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 FAM160A2Q8N612 972 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-228ENST00000486227 ZNF707Q96C28 371 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-228ENST00000486227 BPIFA2Q96DR5 249 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 MSLNLQ96KJ4 702 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 DCBLD2Q96PD2 775 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 ARL6Q9H0F7 186 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 TAS2R3Q9NYW6 316 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 ZNF225Q9UK10 706 aa10.28□□□□□ -0.76
HDAC6-228ENST00000486227 ZNF443Q9Y2A4 671 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-228ENST00000486227 MN1Q10571 1320 aaPredicted RBP10.27□□□□□ -0.76
HDAC6-228ENST00000486227 NUP214P35658 2090 aaPredicted RBP10.27□□□□□ -0.76
HDAC6-228ENST00000486227 NSG1A0A0A6YYJ2 146 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms