RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 SRSF1Q07955 248 aaKnown RBP eCLIP13.88□□□□□ -0.19
HDHD3-203ENST00000485934 MERTKQ12866 999 aa13.88□□□□□ -0.19
HDHD3-203ENST00000485934 FOXF1Q12946 379 aa13.88□□□□□ -0.19
HDHD3-203ENST00000485934 KRT72Q14CN4 511 aa13.88□□□□□ -0.19
HDHD3-203ENST00000485934 WBP2NLQ6ICG8 309 aa13.88□□□□□ -0.19
HDHD3-203ENST00000485934 ZNF836Q6ZNA1 936 aa13.88□□□□□ -0.19
HDHD3-203ENST00000485934 P4HA3Q7Z4N8 544 aa13.88□□□□□ -0.19
HDHD3-203ENST00000485934 PTOV1Q86YD1 416 aa13.88□□□□□ -0.19
HDHD3-203ENST00000485934 ZZZ3Q8IYH5 903 aa13.88□□□□□ -0.19
HDHD3-203ENST00000485934 OR5M1Q8NGP8 315 aa13.88□□□□□ -0.19
HDHD3-203ENST00000485934 BCAS4Q8TDM0 211 aa13.88□□□□□ -0.19
HDHD3-203ENST00000485934 SMPDL3BQ92485 455 aa13.88□□□□□ -0.19
HDHD3-203ENST00000485934 GPATCH1Q9BRR8 931 aaKnown RBP13.88□□□□□ -0.19
HDHD3-203ENST00000485934 PINK1Q9BXM7 581 aa13.88□□□□□ -0.19
HDHD3-203ENST00000485934 RLIMQ9NVW2 624 aa13.88□□□□□ -0.19
HDHD3-203ENST00000485934 MCTS1Q9ULC4 181 aaKnown RBP13.88□□□□□ -0.19
HDHD3-203ENST00000485934 ZNF175Q9Y473 711 aa13.88□□□□□ -0.19
HDHD3-203ENST00000485934 FAM215AQ9Y5M1 114 aa13.88□□□□□ -0.19
HDHD3-203ENST00000485934 EXPH5Q8NEV8 1989 aa13.88□□□□□ -0.19
HDHD3-203ENST00000485934 MBD3L4A6NDZ8 208 aaPredicted RBP13.87□□□□□ -0.19
HDHD3-203ENST00000485934 MBD3L3A6NE82 208 aaPredicted RBP13.87□□□□□ -0.19
HDHD3-203ENST00000485934 MBD3L5A6NJ08 208 aaPredicted RBP13.87□□□□□ -0.19
HDHD3-203ENST00000485934 CLDN24A6NM45 220 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 EIF1AYO14602 144 aaKnown RBP13.87□□□□□ -0.19
HDHD3-203ENST00000485934 SEC14L5O43304 696 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 GMNNO75496 209 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 SYNGR4O95473 234 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 AQP1P29972 269 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 SLC7A1P30825 629 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 POLR2HP52434 150 aaKnown RBP13.87□□□□□ -0.19
HDHD3-203ENST00000485934 CLDN15P56746 228 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 PCBP3P57721 371 aaKnown RBP13.87□□□□□ -0.19
HDHD3-203ENST00000485934 CARD18P57730 90 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 NUP107P57740 925 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 EPS8Q12929 822 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 SELPLGQ14242 412 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 TOMM34Q15785 309 aaPredicted RBP13.87□□□□□ -0.19
HDHD3-203ENST00000485934 DCST1Q5T197 706 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 RTL6Q6ICC9 239 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 PLEKHM3Q6ZWE6 761 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 CCDC80Q76M96 950 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 HMGN2P46Q86SG4 172 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 ADGRE4PQ86SQ3 457 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 CALHM3Q86XJ0 350 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 C10orf111Q8N326 155 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 MBD3L2Q8NHZ7 208 aaPredicted RBP13.87□□□□□ -0.19
HDHD3-203ENST00000485934 POC1BQ8TC44 478 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 SDCCAG3Q96C92 435 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 LRRC46Q96FV0 321 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 KLHL15Q96M94 604 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 ZNF583Q96ND8 569 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 TUBA1CQ9BQE3 449 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 PRRG4Q9BZD6 226 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 SPAG4Q9NPE6 437 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 SELENONQ9NZV5 590 aa13.87□□□□□ -0.19
HDHD3-203ENST00000485934 ZNF629Q9UEG4 869 aaPredicted RBP13.87□□□□□ -0.19
HDHD3-203ENST00000485934 KLF2Q9Y5W3 355 aaPredicted RBP13.87□□□□□ -0.19
HDHD3-203ENST00000485934 PRRC2CQ9Y520 2896 aaKnown RBP13.87□□□□□ -0.19
HDHD3-203ENST00000485934 ELOVL7A1L3X0 281 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 SLC22A20A6NK97 555 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 CLCA1A8K7I4 914 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 FAM220BPB1ANY3 271 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 SYT5O00445 386 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 DVL2O14641 736 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 MFN2O95140 757 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 CLDN14O95500 239 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 CRHP06850 196 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 EIF1AXP47813 144 aaKnown RBP13.86□□□□□ -0.19
HDHD3-203ENST00000485934 GZMMP51124 257 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 NCALDP61601 193 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 MXRA7P84157 204 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 ADORA2A-AS1P86434 159 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 TMEM176BQ3YBM2 270 aaPredicted RBP13.86□□□□□ -0.19
HDHD3-203ENST00000485934 SPATS1Q496A3 300 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 HBMQ6B0K9 141 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 C16orf89Q6UX73 402 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 RANBP3LQ86VV4 465 aaPredicted RBP13.86□□□□□ -0.19
HDHD3-203ENST00000485934 SLC15A3Q8IY34 581 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 CLIP4Q8N3C7 705 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 OR2V1Q8NHB1 315 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 LILRB4Q8NHJ6 448 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 ITLN2Q8WWU7 325 aaPredicted RBP13.86□□□□□ -0.19
HDHD3-203ENST00000485934 OSTF1Q92882 214 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 CPNE4Q96A23 557 aaPredicted RBP13.86□□□□□ -0.19
HDHD3-203ENST00000485934 TRIM8Q9BZR9 551 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 TRIM2Q9C040 744 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 PIF1Q9H611 641 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 CHST11Q9NPF2 352 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 GLRX2Q9NS18 164 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 RPS6KB2Q9UBS0 482 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 CHRNA9Q9UGM1 479 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 BAG5Q9UL15 447 aa13.86□□□□□ -0.19
HDHD3-203ENST00000485934 ZGRF1Q86YA3 2104 aa13.85□□□□□ -0.19
HDHD3-203ENST00000485934 EML6Q6ZMW3 1958 aa13.85□□□□□ -0.19
HDHD3-203ENST00000485934 SHISA8B8ZZ34 492 aa13.85□□□□□ -0.19
HDHD3-203ENST00000485934 GSTA4O15217 222 aa13.85□□□□□ -0.19
HDHD3-203ENST00000485934 ZNF208O43345 1280 aa13.85□□□□□ -0.19
HDHD3-203ENST00000485934 RCBTB2O95199 551 aa13.85□□□□□ -0.19
HDHD3-203ENST00000485934 IL18BPO95998 194 aa13.85□□□□□ -0.19
HDHD3-203ENST00000485934 CXCR1P25024 350 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms