RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 H6PDO95479 791 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 FESP07332 822 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 DANCRP0C864 163 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 CREB1P16220 341 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 PGCP20142 388 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 UQCRC2P22695 453 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 SOAT1P35610 550 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 RNF144AP50876 292 aaPredicted RBP10.16□□□□□ -0.78
SCFD1-206ENST00000484733 RASGEF1BQ0VAM2 473 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 ETFDHQ16134 617 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 PGS1Q32NB8 556 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 ZNF672Q499Z4 452 aaPredicted RBP10.16□□□□□ -0.78
SCFD1-206ENST00000484733 ANXA8L1Q5VT79 327 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 OR4F3Q6IEY1 312 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 KIRREL3Q8IZU9 778 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 ZNF614Q8N883 585 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 SLC25A43Q8WUT9 341 aaPredicted RBP10.16□□□□□ -0.78
SCFD1-206ENST00000484733 ZNF75CPQ92670 426 aaPredicted RBP10.16□□□□□ -0.78
SCFD1-206ENST00000484733 FBXW5Q969U6 566 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 ARID1AO14497 2285 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 IGKV3D-15A0A087WSY6 115 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 GOLGA8QA0A0J9YX86 632 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 RNF103-CHMP3A0A140T963 221 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 A0A1W2PNR3 127 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 GOLGA8OA6NCC3 632 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 GOLGA8NF8WBI6 632 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 KIAA0513O60268 411 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 FCMRO60667 390 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 PGM3O95394 542 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 SERPINE1P05121 402 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 THBS1P07996 1170 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 MYZAPP0CAP1 466 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 FKBP2P26885 142 aaKnown RBP10.16□□□□□ -0.78
SCFD1-206ENST00000484733 ATP5J2P56134 94 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 SESN3P58005 492 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 GPR68Q15743 365 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 TIGD2Q4W5G0 525 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 TMPPEQ6ZT21 453 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 EIF3MQ7L2H7 374 aaKnown RBP10.16□□□□□ -0.78
SCFD1-206ENST00000484733 P2RY8Q86VZ1 359 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 CLECL1Q8IZS7 167 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 TMCO5AQ8N6Q1 288 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 ATP6V1C2Q8NEY4 427 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 RFWD2Q8NHY2 731 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 TESCQ96BS2 214 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 TRMT61AQ96FX7 289 aaKnown RBP10.16□□□□□ -0.78
SCFD1-206ENST00000484733 GRIP2Q9C0E4 1043 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 OR51I1Q9H343 314 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 AKTIPQ9H8T0 292 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 PCDHGB4Q9UN71 923 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 SLC35A3Q9Y2D2 325 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 NUP214P35658 2090 aaPredicted RBP10.15□□□□□ -0.78
SCFD1-206ENST00000484733 PRSS51A0A1B0GVH4 220 aa10.15□□□□□ -0.78
SCFD1-206ENST00000484733 ANKRD28O15084 1053 aa10.15□□□□□ -0.78
SCFD1-206ENST00000484733 ITM2AO43736 263 aa10.15□□□□□ -0.78
SCFD1-206ENST00000484733 CSTAP01040 98 aa10.15□□□□□ -0.78
SCFD1-206ENST00000484733 COX5AP20674 150 aa10.15□□□□□ -0.78
SCFD1-206ENST00000484733 PGM1P36871 562 aa10.15□□□□□ -0.78
SCFD1-206ENST00000484733 APOBEC1P41238 236 aaKnown RBP10.15□□□□□ -0.78
SCFD1-206ENST00000484733 ABCE1P61221 599 aaKnown RBP10.15□□□□□ -0.78
SCFD1-206ENST00000484733 CSNK2A1P68400 391 aaPredicted RBP10.15□□□□□ -0.78
SCFD1-206ENST00000484733 TSC22D1Q15714 1073 aa10.15□□□□□ -0.78
SCFD1-206ENST00000484733 SAXO2Q658L1 398 aa10.15□□□□□ -0.78
SCFD1-206ENST00000484733 ABLIM2Q6H8Q1 611 aa10.15□□□□□ -0.78
SCFD1-206ENST00000484733 WDR93Q6P2C0 686 aa10.15□□□□□ -0.78
SCFD1-206ENST00000484733 MTDHQ86UE4 582 aaKnown RBP10.15□□□□□ -0.78
SCFD1-206ENST00000484733 MREGQ8N565 214 aa10.15□□□□□ -0.78
SCFD1-206ENST00000484733 OR4A15Q8NGL6 344 aa10.15□□□□□ -0.78
SCFD1-206ENST00000484733 DPY30Q9C005 99 aa10.15□□□□□ -0.78
SCFD1-206ENST00000484733 QRSL1Q9H0R6 528 aaKnown RBP10.15□□□□□ -0.78
SCFD1-206ENST00000484733 EXOSC3Q9NQT5 275 aaKnown RBP10.15□□□□□ -0.78
SCFD1-206ENST00000484733 HAO1Q9UJM8 370 aa10.15□□□□□ -0.78
SCFD1-206ENST00000484733 LAMP3Q9UQV4 416 aa10.15□□□□□ -0.78
SCFD1-206ENST00000484733 RAP2CQ9Y3L5 183 aa10.15□□□□□ -0.78
SCFD1-206ENST00000484733 SPIN1Q9Y657 262 aaPredicted RBP10.15□□□□□ -0.78
SCFD1-206ENST00000484733 IGHV3-15A0A0B4J1V0 119 aa10.15□□□□□ -0.79
SCFD1-206ENST00000484733 DPRXA6NFQ7 191 aa10.15□□□□□ -0.79
SCFD1-206ENST00000484733 DNPH1O43598 174 aa10.15□□□□□ -0.79
SCFD1-206ENST00000484733 IDUAP35475 653 aa10.15□□□□□ -0.79
SCFD1-206ENST00000484733 CLK1P49759 484 aaKnown RBP10.15□□□□□ -0.79
SCFD1-206ENST00000484733 RPS26P62854 115 aaKnown RBP10.15□□□□□ -0.79
SCFD1-206ENST00000484733 TIMM23BQ5SRD1 257 aa10.15□□□□□ -0.79
SCFD1-206ENST00000484733 ATAD3BQ5T9A4 648 aa10.15□□□□□ -0.79
SCFD1-206ENST00000484733 C16orf62Q7Z3J2 963 aa10.15□□□□□ -0.79
SCFD1-206ENST00000484733 GALNT5Q7Z7M9 940 aa10.15□□□□□ -0.79
SCFD1-206ENST00000484733 SMAP2Q8WU79 429 aaPredicted RBP10.15□□□□□ -0.79
SCFD1-206ENST00000484733 OR5B2Q96R09 309 aa10.15□□□□□ -0.79
SCFD1-206ENST00000484733 PRSS50Q9UI38 385 aa10.15□□□□□ -0.79
SCFD1-206ENST00000484733 PRDM4Q9UKN5 801 aa10.15□□□□□ -0.79
SCFD1-206ENST00000484733 MKLN1Q9UL63 735 aa10.15□□□□□ -0.79
SCFD1-206ENST00000484733 CENPVL1A0A0U1RR11 272 aa10.14□□□□□ -0.79
SCFD1-206ENST00000484733 PMS2P2O95744 297 aa10.14□□□□□ -0.79
SCFD1-206ENST00000484733 DHRS4L1P0CG22 281 aa10.14□□□□□ -0.79
SCFD1-206ENST00000484733 DIO1P49895 249 aa10.14□□□□□ -0.79
SCFD1-206ENST00000484733 CCR4P51679 360 aa10.14□□□□□ -0.79
SCFD1-206ENST00000484733 CLNS1AP54105 237 aaKnown RBP10.14□□□□□ -0.79
SCFD1-206ENST00000484733 PHC1P78364 1004 aa10.14□□□□□ -0.79
SCFD1-206ENST00000484733 TXNL4AP83876 142 aaKnown RBP10.14□□□□□ -0.79
SCFD1-206ENST00000484733 MERTKQ12866 999 aa10.14□□□□□ -0.79
SCFD1-206ENST00000484733 TNK1Q13470 666 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms