RNA–Protein interactions for RNA: ENST00000484047.5

TTC3-218, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 1,945 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-218ENST00000484047 SLC7A8Q9UHI5 535 aa7.56□□□□□ -1.2
TTC3-218ENST00000484047 A0A1W2PNV4 684 aa7.56□□□□□ -1.2
TTC3-218ENST00000484047 NPIPA7E9PJI5 369 aa7.56□□□□□ -1.2
TTC3-218ENST00000484047 PPIHO43447 177 aaKnown RBP7.56□□□□□ -1.2
TTC3-218ENST00000484047 TNFSF12O43508 249 aa7.56□□□□□ -1.2
TTC3-218ENST00000484047 TPM1P09493 284 aa7.56□□□□□ -1.2
TTC3-218ENST00000484047 NPIPA8P0DM63 369 aa7.56□□□□□ -1.2
TTC3-218ENST00000484047 AOC1P19801 751 aa7.56□□□□□ -1.2
TTC3-218ENST00000484047 GDF5P43026 501 aa7.56□□□□□ -1.2
TTC3-218ENST00000484047 NOVA1P51513 510 aaKnown RBP7.56□□□□□ -1.2
TTC3-218ENST00000484047 TTC19Q6DKK2 380 aaPredicted RBP7.56□□□□□ -1.2
TTC3-218ENST00000484047 TSEN54Q7Z6J9 526 aaKnown RBP7.56□□□□□ -1.2
TTC3-218ENST00000484047 RBM23Q86U06 439 aaKnown RBP7.56□□□□□ -1.2
TTC3-218ENST00000484047 KCNMB4Q86W47 210 aa7.56□□□□□ -1.2
TTC3-218ENST00000484047 GTPBP8Q8N3Z3 284 aaPredicted RBP7.56□□□□□ -1.2
TTC3-218ENST00000484047 SDR9C7Q8NEX9 313 aa7.56□□□□□ -1.2
TTC3-218ENST00000484047 ZBED3Q96IU2 234 aaPredicted RBP7.56□□□□□ -1.2
TTC3-218ENST00000484047 TRIM62Q9BVG3 475 aa7.56□□□□□ -1.2
TTC3-218ENST00000484047 C1QTNF4Q9BXJ3 329 aa7.56□□□□□ -1.2
TTC3-218ENST00000484047 NXF5Q9H1B4 397 aaKnown RBP7.56□□□□□ -1.2
TTC3-218ENST00000484047 NMUR1Q9HB89 426 aa7.56□□□□□ -1.2
TTC3-218ENST00000484047 ADGRL4Q9HBW9 690 aa7.56□□□□□ -1.2
TTC3-218ENST00000484047 IL1RAPQ9NPH3 570 aa7.56□□□□□ -1.2
TTC3-218ENST00000484047 PDP1Q9P0J1 537 aaPredicted RBP7.56□□□□□ -1.2
TTC3-218ENST00000484047 CYTH4Q9UIA0 394 aa7.56□□□□□ -1.2
TTC3-218ENST00000484047 NPIPA1Q9UND3 350 aa7.56□□□□□ -1.2
TTC3-218ENST00000484047 PACSIN2Q9UNF0 486 aaPredicted RBP7.56□□□□□ -1.2
TTC3-218ENST00000484047 MRPS18CQ9Y3D5 142 aaKnown RBP7.56□□□□□ -1.2
TTC3-218ENST00000484047 SCN4AP35499 1836 aa7.56□□□□□ -1.2
TTC3-218ENST00000484047 ROBO3Q96MS0 1386 aa7.55□□□□□ -1.2
TTC3-218ENST00000484047 PLSCR5A0PG75 271 aa7.55□□□□□ -1.2
TTC3-218ENST00000484047 N4BP1O75113 896 aaKnown RBP7.55□□□□□ -1.2
TTC3-218ENST00000484047 GAPDHP04406 335 aaKnown RBP7.55□□□□□ -1.2
TTC3-218ENST00000484047 TUBG1P23258 451 aa7.55□□□□□ -1.2
TTC3-218ENST00000484047 CASP14P31944 242 aa7.55□□□□□ -1.2
TTC3-218ENST00000484047 ATP5C1P36542 298 aaKnown RBP7.55□□□□□ -1.2
TTC3-218ENST00000484047 EPS15P42566 896 aa7.55□□□□□ -1.2
TTC3-218ENST00000484047 EFNB2P52799 333 aa7.55□□□□□ -1.2
TTC3-218ENST00000484047 BST2Q10589 180 aaKnown RBP7.55□□□□□ -1.2
TTC3-218ENST00000484047 TRDNQ13061 729 aa7.55□□□□□ -1.2
TTC3-218ENST00000484047 TMEM187Q14656 261 aa7.55□□□□□ -1.2
TTC3-218ENST00000484047 CD226Q15762 336 aa7.55□□□□□ -1.2
TTC3-218ENST00000484047 SLC5A12Q1EHB4 618 aa7.55□□□□□ -1.2
TTC3-218ENST00000484047 TP53I3Q53FA7 332 aa7.55□□□□□ -1.2
TTC3-218ENST00000484047 PIP5KL1Q5T9C9 394 aa7.55□□□□□ -1.2
TTC3-218ENST00000484047 RAET1LQ5VY80 246 aa7.55□□□□□ -1.2
TTC3-218ENST00000484047 SLCO2A1Q92959 643 aa7.55□□□□□ -1.2
TTC3-218ENST00000484047 CD101Q93033 1021 aa7.55□□□□□ -1.2
TTC3-218ENST00000484047 BIRC7Q96CA5 298 aa7.55□□□□□ -1.2
TTC3-218ENST00000484047 RAB3CQ96E17 227 aa7.55□□□□□ -1.2
TTC3-218ENST00000484047 RNF41Q9H4P4 317 aaPredicted RBP7.55□□□□□ -1.2
TTC3-218ENST00000484047 ZNF71Q9NQZ8 489 aaPredicted RBP7.55□□□□□ -1.2
TTC3-218ENST00000484047 TUBG2Q9NRH3 451 aa7.55□□□□□ -1.2
TTC3-218ENST00000484047 ZFP57Q9NU63 452 aa7.55□□□□□ -1.2
TTC3-218ENST00000484047 ZNF221Q9UK13 617 aa7.55□□□□□ -1.2
TTC3-218ENST00000484047 CSDC2Q9Y534 153 aaKnown RBP7.55□□□□□ -1.2
TTC3-218ENST00000484047 SUPT3HB4E1H0 165 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 PAX1P15863 534 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 SLC1A4P43007 532 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 ZNF85Q03923 595 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 LIPEQ05469 1076 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 ILF3Q12906 894 aaKnown RBP eCLIP7.54□□□□□ -1.2
TTC3-218ENST00000484047 EMC2Q15006 297 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 RAB35Q15286 201 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 KNOP1Q1ED39 458 aaKnown RBP7.54□□□□□ -1.2
TTC3-218ENST00000484047 SNAI3Q3KNW1 292 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 KIAA1161Q6NSJ0 714 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 PRSS57Q6UWY2 283 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 COMMD1Q8N668 190 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 Q8N9G6 341 aaPredicted RBP7.54□□□□□ -1.2
TTC3-218ENST00000484047 OR6S1Q8NH40 331 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 FAM110BQ8TC76 370 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 DYNLL2Q96FJ2 89 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 ZNF479Q96JC4 524 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 CCT8L2Q96SF2 557 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 FEM1AQ9BSK4 669 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 ZDHHC18Q9NUE0 388 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 FRMPD4Q14CM0 1322 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 WDR90Q96KV7 1748 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 PPIAL4EA0A075B759 164 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 NPIPA5A0A0B4J1W7 369 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 NPIPA5E9PKD4 350 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 HAS3O00219 553 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 SPOPO43791 374 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 PDE5AO76074 875 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 LRATO95237 230 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 JCHAINP01591 159 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 S100A9P06702 114 aaKnown RBP7.54□□□□□ -1.2
TTC3-218ENST00000484047 PPIAL4FP0DN26 164 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 STK19P49842 368 aaPredicted RBP7.54□□□□□ -1.2
TTC3-218ENST00000484047 CLDN8P56748 225 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 IL9RQ01113 521 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 EIF2B1Q14232 305 aaKnown RBP7.54□□□□□ -1.2
TTC3-218ENST00000484047 SCYL2Q6P3W7 929 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 TMEM107Q6UX40 140 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 H2BFWTQ7Z2G1 175 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 ZNF707Q96C28 371 aaPredicted RBP7.54□□□□□ -1.2
TTC3-218ENST00000484047 HAVCR1Q96D42 359 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 AUNIPQ9H7T9 357 aa7.54□□□□□ -1.2
TTC3-218ENST00000484047 PPIAL4AQ9Y536 164 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms