RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 GJE1A6NN92 205 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 SYT5O00445 386 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 ADAM11O75078 769 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 CYP7B1O75881 506 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 TNFSF13O75888 250 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 ARAFP10398 606 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 IL7RP16871 459 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 SHC1P29353 583 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 GUSBP1Q15486 140 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 ZSWIM7Q19AV6 140 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 LIN52Q52LA3 116 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 RUNDC3AQ59EK9 446 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 COQ5Q5HYK3 327 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 MRPL2Q5T653 305 aaKnown RBP16.16■□□□□ 0.18
HDAC6-225ENST00000483506 RNF220Q5VTB9 566 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 HMGN2P46Q86SG4 172 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 DHDDSQ86SQ9 333 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 DMRTC2Q8IXT2 367 aaPredicted RBP16.16■□□□□ 0.18
HDAC6-225ENST00000483506 OR52P1PQ8NH57 321 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 BBS10Q8TAM1 723 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 CNOT9Q92600 299 aaKnown RBP16.16■□□□□ 0.18
HDAC6-225ENST00000483506 INTS12Q96CB8 462 aaKnown RBP16.16■□□□□ 0.18
HDAC6-225ENST00000483506 TMEM38AQ9H6F2 299 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 TMEM185BQ9H7F4 350 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 APCP25054 2843 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 A0A1W2PNV4 684 aa16.15■□□□□ 0.18
HDAC6-225ENST00000483506 EVPLLA8MZ36 301 aa16.15■□□□□ 0.18
HDAC6-225ENST00000483506 TNFSF11O14788 317 aa16.15■□□□□ 0.18
HDAC6-225ENST00000483506 SLC22A2O15244 555 aa16.15■□□□□ 0.18
HDAC6-225ENST00000483506 FBN2P35556 2912 aa16.15■□□□□ 0.18
HDAC6-225ENST00000483506 EIF1AXP47813 144 aaKnown RBP16.15■□□□□ 0.18
HDAC6-225ENST00000483506 CACNA1DQ01668 2161 aa16.15■□□□□ 0.18
HDAC6-225ENST00000483506 RPS26P11Q5JNZ5 115 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-225ENST00000483506 PDSS1Q5T2R2 415 aa16.15■□□□□ 0.18
HDAC6-225ENST00000483506 GCNT6Q5T4J0 391 aa16.15■□□□□ 0.18
HDAC6-225ENST00000483506 C3orf33Q6P1S2 294 aa16.15■□□□□ 0.18
HDAC6-225ENST00000483506 ZNF836Q6ZNA1 936 aa16.15■□□□□ 0.18
HDAC6-225ENST00000483506 PLEKHM3Q6ZWE6 761 aa16.15■□□□□ 0.18
HDAC6-225ENST00000483506 P4HA3Q7Z4N8 544 aa16.15■□□□□ 0.18
HDAC6-225ENST00000483506 ZNF440Q8IYI8 595 aa16.15■□□□□ 0.18
HDAC6-225ENST00000483506 MAL2Q969L2 176 aa16.15■□□□□ 0.18
HDAC6-225ENST00000483506 ANKRD27Q96NW4 1050 aa16.15■□□□□ 0.18
HDAC6-225ENST00000483506 CGREF1Q99674 301 aa16.15■□□□□ 0.18
HDAC6-225ENST00000483506 CCDC106Q9BWC9 280 aa16.15■□□□□ 0.18
HDAC6-225ENST00000483506 TRIM8Q9BZR9 551 aa16.15■□□□□ 0.18
HDAC6-225ENST00000483506 PIGMQ9H3S5 423 aa16.15■□□□□ 0.18
HDAC6-225ENST00000483506 COQ10BQ9H8M1 238 aa16.15■□□□□ 0.18
HDAC6-225ENST00000483506 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-225ENST00000483506 FOXD3Q9UJU5 478 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-225ENST00000483506 ZNF443Q9Y2A4 671 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-225ENST00000483506 IFT52Q9Y366 437 aa16.15■□□□□ 0.18
HDAC6-225ENST00000483506 FBP2O00757 339 aa16.14■□□□□ 0.17
HDAC6-225ENST00000483506 AQP8O94778 261 aa16.14■□□□□ 0.17
HDAC6-225ENST00000483506 PGM3O95394 542 aa16.14■□□□□ 0.17
HDAC6-225ENST00000483506 ETS2P15036 469 aa16.14■□□□□ 0.17
HDAC6-225ENST00000483506 PEX19P40855 299 aa16.14■□□□□ 0.17
HDAC6-225ENST00000483506 EPS8Q12929 822 aa16.14■□□□□ 0.17
HDAC6-225ENST00000483506 KLF10Q13118 480 aa16.14■□□□□ 0.17
HDAC6-225ENST00000483506 LARS2Q15031 903 aaKnown RBP16.14■□□□□ 0.17
HDAC6-225ENST00000483506 ADRM1Q16186 407 aa16.14■□□□□ 0.17
HDAC6-225ENST00000483506 SGCBQ16585 318 aa16.14■□□□□ 0.17
HDAC6-225ENST00000483506 HBMQ6B0K9 141 aa16.14■□□□□ 0.17
HDAC6-225ENST00000483506 MEX3BQ6ZN04 569 aaKnown RBP16.14■□□□□ 0.17
HDAC6-225ENST00000483506 GRINAQ7Z429 371 aa16.14■□□□□ 0.17
HDAC6-225ENST00000483506 VRK2Q86Y07 508 aa16.14■□□□□ 0.17
HDAC6-225ENST00000483506 GCNT2Q8N0V5 402 aa16.14■□□□□ 0.17
HDAC6-225ENST00000483506 RNASE6Q93091 150 aaKnown RBP16.14■□□□□ 0.17
HDAC6-225ENST00000483506 SLC35B4Q969S0 331 aa16.14■□□□□ 0.17
HDAC6-225ENST00000483506 MCTS1Q9ULC4 181 aaKnown RBP16.14■□□□□ 0.17
HDAC6-225ENST00000483506 CHST2Q9Y4C5 530 aa16.14■□□□□ 0.17
HDAC6-225ENST00000483506 CFAP73A6NFT4 308 aa16.13■□□□□ 0.17
HDAC6-225ENST00000483506 BBIP1A8MTZ0 92 aa16.13■□□□□ 0.17
HDAC6-225ENST00000483506 CXCL13O43927 109 aa16.13■□□□□ 0.17
HDAC6-225ENST00000483506 OPN1LWP04000 364 aa16.13■□□□□ 0.17
HDAC6-225ENST00000483506 PABPC4LP0CB38 370 aaKnown RBP16.13■□□□□ 0.17
HDAC6-225ENST00000483506 SFTPDP35247 375 aa16.13■□□□□ 0.17
HDAC6-225ENST00000483506 APOBEC1P41238 236 aaKnown RBP16.13■□□□□ 0.17
HDAC6-225ENST00000483506 KIR2DL2P43627 348 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-225ENST00000483506 NFYCQ13952 458 aa16.13■□□□□ 0.17
HDAC6-225ENST00000483506 MAPRE2Q15555 327 aa16.13■□□□□ 0.17
HDAC6-225ENST00000483506 TRMT5Q32P41 509 aaKnown RBP16.13■□□□□ 0.17
HDAC6-225ENST00000483506 TMEM176BQ3YBM2 270 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-225ENST00000483506 REEP3Q6NUK4 255 aa16.13■□□□□ 0.17
HDAC6-225ENST00000483506 ZNF295-AS1Q8N0V1 137 aa16.13■□□□□ 0.17
HDAC6-225ENST00000483506 ZNF563Q8TA94 476 aa16.13■□□□□ 0.17
HDAC6-225ENST00000483506 SLC25A43Q8WUT9 341 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-225ENST00000483506 CPNE4Q96A23 557 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-225ENST00000483506 C14orf79Q96F83 325 aa16.13■□□□□ 0.17
HDAC6-225ENST00000483506 LRRC46Q96FV0 321 aa16.13■□□□□ 0.17
HDAC6-225ENST00000483506 SPATA9Q9BWV2 254 aa16.13■□□□□ 0.17
HDAC6-225ENST00000483506 SLC24A3Q9HC58 644 aa16.13■□□□□ 0.17
HDAC6-225ENST00000483506 TIGARQ9NQ88 270 aa16.13■□□□□ 0.17
HDAC6-225ENST00000483506 PACSIN3Q9UKS6 424 aa16.13■□□□□ 0.17
HDAC6-225ENST00000483506 TEX15Q9BXT5 2789 aa16.13■□□□□ 0.17
HDAC6-225ENST00000483506 C5orf58C9J3I9 102 aa16.12■□□□□ 0.17
HDAC6-225ENST00000483506 DYNC1I1O14576 645 aa16.12■□□□□ 0.17
HDAC6-225ENST00000483506 AP3D1O14617 1153 aa16.12■□□□□ 0.17
HDAC6-225ENST00000483506 NPPAP01160 153 aa16.12■□□□□ 0.17
HDAC6-225ENST00000483506 PRF1P14222 555 aa16.12■□□□□ 0.17
HDAC6-225ENST00000483506 UQCRBP14927 111 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms