RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 TMCO5AQ8N6Q1 288 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 PSD4Q8NDX1 1056 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 OR10G2Q8NGC3 310 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 OR9Q2Q8NGE9 314 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 GIPC3Q8TF64 312 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 TMEM255BQ8WV15 326 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 ACOT11Q8WXI4 607 aaPredicted RBP7.5□□□□□ -1.21
USP4-210ENST00000483212 SLC38A4Q969I6 547 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 TMEM41AQ96HV5 264 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 AGAP4Q96P64 663 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 NPAS1Q99742 590 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 GPA33Q99795 319 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 ADAM19Q9H013 955 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 TMEM27Q9HBJ8 222 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 PLA2G3Q9NZ20 509 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 LRFN1Q9P244 771 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 FBXL2Q9UKC9 423 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 PRDM4Q9UKN5 801 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 LHX6Q9UPM6 363 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 LOC400499M0QZD8 3231 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 NCOR2Q9Y618 2525 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 MED13Q9UHV7 2174 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 IGKV1D-42A0A075B6H8 117 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 A0A087WUJ7 227 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 PINLYPA6NC86 204 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 OR5H15A6NDH6 313 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 A6NL46 340 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 G3V3Y1 287 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 K7ENP7 123 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 TAF4O00268 1085 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 PIP5K1CO60331 668 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 MITFO75030 526 aaPredicted RBP7.49□□□□□ -1.21
USP4-210ENST00000483212 SNX4O95219 450 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 F10P00742 488 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 GASTP01350 101 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 PRKCAP17252 672 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 PGCP20142 388 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 SLC1A3P43003 542 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 OMPP47874 163 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 CCL11P51671 97 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 CCR4P51679 360 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 FOXO1Q12778 655 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 CBFBQ13951 182 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 OR1C1Q15619 314 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 NHSL2Q5HYW2 709 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 ALG10BQ5I7T1 473 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 FGD3Q5JSP0 725 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 DCST1Q5T197 706 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 TIGD3Q6B0B8 471 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 WBP2NLQ6ICG8 309 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 SPINK14Q6IE38 97 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 C1orf94Q6P1W5 598 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 ULK3Q6PHR2 472 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 INO80CQ6PI98 192 aaPredicted RBP7.49□□□□□ -1.21
USP4-210ENST00000483212 ARSKQ6UWY0 536 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 CCDC81Q6ZN84 652 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 MBOAT2Q6ZWT7 520 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 PRICKLE2Q7Z3G6 844 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 ZER1Q7Z7L7 766 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 PLCZ1Q86YW0 608 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 CADM2Q8N3J6 435 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 GALNT4Q8N4A0 578 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 OR4K5Q8NGD3 323 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 POC1BQ8TC44 478 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 MAGEE2Q8TD90 523 aaPredicted RBP7.49□□□□□ -1.21
USP4-210ENST00000483212 DNAJA4Q8WW22 397 aaPredicted RBP7.49□□□□□ -1.21
USP4-210ENST00000483212 TMEM239Q8WW34 195 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 HAS2Q92819 552 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 SCMH1Q96GD3 660 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 MPP4Q96JB8 637 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 MBOAT4Q96T53 435 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 FEVQ99581 238 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 SMAD5Q99717 465 aaKnown RBP7.49□□□□□ -1.21
USP4-210ENST00000483212 NIPSNAP1Q9BPW8 284 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 RBM4BQ9BQ04 359 aaKnown RBP7.49□□□□□ -1.21
USP4-210ENST00000483212 UTP23Q9BRU9 249 aaKnown RBP7.49□□□□□ -1.21
USP4-210ENST00000483212 RBM4Q9BWF3 364 aaKnown RBP7.49□□□□□ -1.21
USP4-210ENST00000483212 DGCR6LQ9BY27 220 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 HES7Q9BYE0 225 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 VCX3BQ9H321 246 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 DSN1Q9H410 356 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 C12orf10Q9HB07 376 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 HHATLQ9HCP6 504 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 MEPEQ9NQ76 525 aaPredicted RBP7.49□□□□□ -1.21
USP4-210ENST00000483212 SDHAF3Q9NRP4 125 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 SACM1LQ9NTJ5 587 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 MED17Q9NVC6 651 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 TAS2R10Q9NYW0 307 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 MED11Q9P086 117 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 PPP4R1LQ9P1A2 415 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 ABI3Q9P2A4 366 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 OSGIN1Q9UJX0 560 aa7.49□□□□□ -1.21
USP4-210ENST00000483212 DMXL2Q8TDJ6 3036 aa7.48□□□□□ -1.21
USP4-210ENST00000483212 A0A087WV48 116 aa7.48□□□□□ -1.21
USP4-210ENST00000483212 MED19A0JLT2 244 aaPredicted RBP7.48□□□□□ -1.21
USP4-210ENST00000483212 C1QTNF9BB2RNN3 333 aa7.48□□□□□ -1.21
USP4-210ENST00000483212 GNB5O14775 395 aa7.48□□□□□ -1.21
USP4-210ENST00000483212 LAMA5O15230 3695 aa7.48□□□□□ -1.21
USP4-210ENST00000483212 EFNA2O43921 213 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms