RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 SLC35F4A4IF30 521 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 CCT8L1PA6NM43 557 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 ZNF724A8MTY0 619 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 NPIPB8E9PQR5 432 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 H3BNH8 94 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 KIF2AO00139 706 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-206ENST00000483030 SMAD9O15198 467 aaKnown RBP6.5□□□□□ -1.37
CSDE1-206ENST00000483030 CYTIPO60759 359 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 RAD51DO75771 328 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 LY6HO94772 140 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 HSPA4LO95757 839 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 IGHV3-9P01782 118 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 HMGN2P05204 90 aaKnown RBP6.5□□□□□ -1.37
CSDE1-206ENST00000483030 GSTA1P08263 222 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 DHRS4L1P0CG22 281 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 PRKCAP17252 672 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 NAT1P18440 290 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 COX5AP20674 150 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 ATP6V1C1P21283 382 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 IGFBP5P24593 272 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 PTAFRP25105 342 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 CD40P25942 277 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 FRKP42685 505 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-206ENST00000483030 EFNA4P52798 201 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 SUMO3P55854 103 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-206ENST00000483030 SPOCK1Q08629 439 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 LASP1Q14847 261 aaKnown RBP6.5□□□□□ -1.37
CSDE1-206ENST00000483030 ARL13AQ5H913 290 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-206ENST00000483030 EXOSC6Q5RKV6 272 aaKnown RBP6.5□□□□□ -1.37
CSDE1-206ENST00000483030 FAM120AOSQ5T036 256 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.5□□□□□ -1.37
CSDE1-206ENST00000483030 FBXW9Q5XUX1 488 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 CDC73Q6P1J9 531 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 KLHL17Q6TDP4 642 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 SYT10Q6XYQ8 523 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 B3GLCTQ6Y288 498 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 SSX8Q7RTT4 187 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 ZNF572Q7Z3I7 529 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-206ENST00000483030 GALNT5Q7Z7M9 940 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 UBE2J2Q8N2K1 259 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 ZNF527Q8NB42 609 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 CLHC1Q8NHS4 586 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 PROX1Q92786 737 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 FAM120BQ96EK7 910 aaKnown RBP6.5□□□□□ -1.37
CSDE1-206ENST00000483030 MRGPRX4Q96LA9 322 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 TSSK3Q96PN8 268 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 OR5B2Q96R09 309 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 HOXD1Q9GZZ0 328 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 PIGUQ9H490 435 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 ANKZF1Q9H8Y5 726 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 TNFRSF12AQ9NP84 129 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 ACSS1Q9NUB1 689 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-206ENST00000483030 C1orf109Q9NX04 203 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 KCNS2Q9ULS6 477 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 PTGDR2Q9Y5Y4 395 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 ACTL7BQ9Y614 415 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 SLC25A15Q9Y619 301 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 KCNE3Q9Y6H6 103 aa6.5□□□□□ -1.37
CSDE1-206ENST00000483030 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.49□□□□□ -1.371e-9■■■■■ 38.6
CSDE1-206ENST00000483030 ESPNB1AK53 854 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 G3V2L1 256 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 H7C417 338 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 M0R1B8 84 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 SLC28A1O00337 649 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 LCE2BO14633 110 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 TBX19O60806 448 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 H6PDO95479 791 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 CSF3P09919 207 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 UROSP10746 265 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 MYL2P10916 166 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 BMP4P12644 408 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 SDC1P18827 310 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 GCAP28676 217 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 GZMKP49863 264 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 DIO1P49895 249 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 CCR4P51679 360 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 ATP12AP54707 1039 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 ETF1P62495 437 aaKnown RBP6.49□□□□□ -1.37
CSDE1-206ENST00000483030 CHRNB3Q05901 458 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 SELENBP1Q13228 472 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 GGTLC2Q14390 218 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 QPRTQ15274 297 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 TIGD2Q4W5G0 525 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 RFTN2Q52LD8 501 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-206ENST00000483030 SLC25A53Q5H9E4 307 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 CFAP157Q5JU67 520 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 LIPNQ5VXI9 398 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 CLEC6AQ6EIG7 209 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 FAM166AQ6J272 317 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 ZNF544Q6NX49 715 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 TMPPEQ6ZT21 453 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 LCA5Q86VQ0 697 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 TMCO5AQ8N6Q1 288 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 ZNF614Q8N883 585 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 OR5W2Q8NH69 310 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 ARL8AQ96BM9 186 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 C3orf49Q96BT1 292 aa6.49□□□□□ -1.37
CSDE1-206ENST00000483030 MSI2Q96DH6 328 aaKnown RBP6.49□□□□□ -1.37
CSDE1-206ENST00000483030 ZNF764Q96H86 408 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-206ENST00000483030 METTL2AQ96IZ6 378 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms