RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 GABRG1Q8N1C3 465 aa16.5■□□□□ 0.23
CLK1-211ENST00000481641 ZNF619Q8N2I2 560 aa16.5■□□□□ 0.23
CLK1-211ENST00000481641 PAIP2Q9BPZ3 127 aaKnown RBP16.5■□□□□ 0.23
CLK1-211ENST00000481641 ZNF350Q9GZX5 532 aa16.5■□□□□ 0.23
CLK1-211ENST00000481641 FANCFQ9NPI8 374 aa16.5■□□□□ 0.23
CLK1-211ENST00000481641 ING1Q9UK53 422 aaPredicted RBP16.5■□□□□ 0.23
CLK1-211ENST00000481641 PRSS51A0A1B0GVH4 220 aa16.49■□□□□ 0.23
CLK1-211ENST00000481641 ETV2O00321 342 aaPredicted RBP16.49■□□□□ 0.23
CLK1-211ENST00000481641 AK1P00568 194 aa16.49■□□□□ 0.23
CLK1-211ENST00000481641 ADAP00813 363 aa16.49■□□□□ 0.23
CLK1-211ENST00000481641 YES1P07947 543 aa16.49■□□□□ 0.23
CLK1-211ENST00000481641 UQCRC2P22695 453 aa16.49■□□□□ 0.23
CLK1-211ENST00000481641 EDNRAP25101 427 aa16.49■□□□□ 0.23
CLK1-211ENST00000481641 SESN3P58005 492 aa16.49■□□□□ 0.23
CLK1-211ENST00000481641 RAC3P60763 192 aa16.49■□□□□ 0.23
CLK1-211ENST00000481641 STX3Q13277 289 aa16.49■□□□□ 0.23
CLK1-211ENST00000481641 TNFAIP8L3Q5GJ75 292 aa16.49■□□□□ 0.23
CLK1-211ENST00000481641 TYW3Q6IPR3 259 aaKnown RBP16.49■□□□□ 0.23
CLK1-211ENST00000481641 CLEC9AQ6UXN8 241 aa16.49■□□□□ 0.23
CLK1-211ENST00000481641 PLEKHM3Q6ZWE6 761 aa16.49■□□□□ 0.23
CLK1-211ENST00000481641 RAB3IL1Q8TBN0 382 aa16.49■□□□□ 0.23
CLK1-211ENST00000481641 MIPOL1Q8TD10 442 aa16.49■□□□□ 0.23
CLK1-211ENST00000481641 ZG16BQ96DA0 208 aa16.49■□□□□ 0.23
CLK1-211ENST00000481641 DNAJA3Q96EY1 480 aa16.49■□□□□ 0.23
CLK1-211ENST00000481641 TEX37Q96LM6 180 aa16.49■□□□□ 0.23
CLK1-211ENST00000481641 OR5B2Q96R09 309 aa16.49■□□□□ 0.23
CLK1-211ENST00000481641 EXD2Q9NVH0 621 aa16.49■□□□□ 0.23
CLK1-211ENST00000481641 PRAMEF27A3QJZ7 478 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 TRIM64A6NGJ6 449 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 TRIM64BA6NI03 449 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 ZNF814B7Z6K7 855 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 H7C1Q1 480 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 SMAD7O15105 426 aaKnown RBP16.48■□□□□ 0.23
CLK1-211ENST00000481641 SMAD9O15198 467 aaKnown RBP16.48■□□□□ 0.23
CLK1-211ENST00000481641 DNAJA2O60884 412 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 LBPP18428 481 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 PTH2RP49190 550 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 BST1Q10588 318 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 MERTKQ12866 999 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 CASP8Q14790 479 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 FAM174BQ3ZCQ3 159 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 SFRP5Q5T4F7 317 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 ANXA8L1Q5VT79 327 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 SAXO2Q658L1 398 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 ATG4DQ86TL0 474 aaPredicted RBP16.48■□□□□ 0.23
CLK1-211ENST00000481641 ANKRD42Q8N9B4 389 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 STEAP2Q8NFT2 490 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 IGFBPL1Q8WX77 278 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 TESCQ96BS2 214 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 ROPN1LQ96C74 230 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 ZNF300Q96RE9 604 aaPredicted RBP16.48■□□□□ 0.23
CLK1-211ENST00000481641 PSD2Q9BQI7 771 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 OR10A4Q9H209 315 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 MEAF6Q9HAF1 191 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 PRSS50Q9UI38 385 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 HAO1Q9UJM8 370 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 WDR45Q9Y484 360 aa16.48■□□□□ 0.23
CLK1-211ENST00000481641 CLDN24A6NM45 220 aa16.47■□□□□ 0.23
CLK1-211ENST00000481641 KIAA0513O60268 411 aa16.47■□□□□ 0.23
CLK1-211ENST00000481641 LY6G6DO95868 133 aa16.47■□□□□ 0.23
CLK1-211ENST00000481641 ALDOCP09972 364 aaKnown RBP16.47■□□□□ 0.23
CLK1-211ENST00000481641 IL32P24001 234 aa16.47■□□□□ 0.23
CLK1-211ENST00000481641 IL12AP29459 219 aa16.47■□□□□ 0.23
CLK1-211ENST00000481641 RYKP34925 604 aa16.47■□□□□ 0.23
CLK1-211ENST00000481641 PGM1P36871 562 aa16.47■□□□□ 0.23
CLK1-211ENST00000481641 NR1H2P55055 460 aa16.47■□□□□ 0.23
CLK1-211ENST00000481641 UFM1P61960 85 aa16.47■□□□□ 0.23
CLK1-211ENST00000481641 RASGEF1BQ0VAM2 473 aa16.47■□□□□ 0.23
CLK1-211ENST00000481641 TAB1Q15750 504 aa16.47■□□□□ 0.23
CLK1-211ENST00000481641 ATAD3BQ5T9A4 648 aa16.47■□□□□ 0.23
CLK1-211ENST00000481641 C3orf33Q6P1S2 294 aa16.47■□□□□ 0.23
CLK1-211ENST00000481641 FRRS1Q6ZNA5 592 aa16.47■□□□□ 0.23
CLK1-211ENST00000481641 EIF3MQ7L2H7 374 aaKnown RBP16.47■□□□□ 0.23
CLK1-211ENST00000481641 SLC43A2Q8N370 569 aa16.47■□□□□ 0.23
CLK1-211ENST00000481641 VPS37AQ8NEZ2 397 aa16.47■□□□□ 0.23
CLK1-211ENST00000481641 ST8SIA1Q92185 356 aa16.47■□□□□ 0.23
CLK1-211ENST00000481641 AKAP1Q92667 903 aaKnown RBP eCLIP16.47■□□□□ 0.23
CLK1-211ENST00000481641 SLC35A5Q9BS91 424 aa16.47■□□□□ 0.23
CLK1-211ENST00000481641 TMEM204Q9BSN7 226 aa16.47■□□□□ 0.23
CLK1-211ENST00000481641 ACER3Q9NUN7 267 aa16.47■□□□□ 0.23
CLK1-211ENST00000481641 SDHDO14521 159 aa16.46■□□□□ 0.23
CLK1-211ENST00000481641 HS3ST1O14792 307 aa16.46■□□□□ 0.23
CLK1-211ENST00000481641 PGCP20142 388 aa16.46■□□□□ 0.23
CLK1-211ENST00000481641 S100A3P33764 101 aa16.46■□□□□ 0.23
CLK1-211ENST00000481641 CHI3L1P36222 383 aaPredicted RBP16.46■□□□□ 0.23
CLK1-211ENST00000481641 CLNS1AP54105 237 aaKnown RBP16.46■□□□□ 0.23
CLK1-211ENST00000481641 PLAURQ03405 335 aa16.46■□□□□ 0.23
CLK1-211ENST00000481641 CHRNEQ04844 493 aa16.46■□□□□ 0.23
CLK1-211ENST00000481641 GPAT3Q53EU6 434 aa16.46■□□□□ 0.23
CLK1-211ENST00000481641 PRSS57Q6UWY2 283 aa16.46■□□□□ 0.23
CLK1-211ENST00000481641 FAM71CQ8NEG0 241 aa16.46■□□□□ 0.23
CLK1-211ENST00000481641 LILRB1Q8NHL6 650 aaPredicted RBP16.46■□□□□ 0.23
CLK1-211ENST00000481641 ZNF75CPQ92670 426 aaPredicted RBP16.46■□□□□ 0.23
CLK1-211ENST00000481641 NEUROG1Q92886 237 aa16.46■□□□□ 0.23
CLK1-211ENST00000481641 NEURL3Q96EH8 262 aa16.46■□□□□ 0.23
CLK1-211ENST00000481641 COX4I2Q96KJ9 171 aa16.46■□□□□ 0.23
CLK1-211ENST00000481641 TACO1Q9BSH4 297 aaKnown RBP16.46■□□□□ 0.23
CLK1-211ENST00000481641 INPP5KQ9BT40 448 aa16.46■□□□□ 0.23
CLK1-211ENST00000481641 HDHD5Q9BXW7 423 aa16.46■□□□□ 0.23
CLK1-211ENST00000481641 SAP130Q9H0E3 1048 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms