RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 SLC9B1Q4ZJI4 515 aa13.71□□□□□ -0.21
CDK9-203ENST00000480353 ANKRD34AQ69YU3 496 aa13.71□□□□□ -0.21
CDK9-203ENST00000480353 DNAJC14Q6Y2X3 702 aaPredicted RBP13.71□□□□□ -0.21
CDK9-203ENST00000480353 FRRS1Q6ZNA5 592 aa13.71□□□□□ -0.21
CDK9-203ENST00000480353 MIER2Q8N344 545 aa13.71□□□□□ -0.21
CDK9-203ENST00000480353 SLC43A2Q8N370 569 aa13.71□□□□□ -0.21
CDK9-203ENST00000480353 PNPT1Q8TCS8 783 aaKnown RBP13.71□□□□□ -0.21
CDK9-203ENST00000480353 ABHD3Q8WU67 409 aa13.71□□□□□ -0.21
CDK9-203ENST00000480353 ZNF75CPQ92670 426 aaPredicted RBP13.71□□□□□ -0.21
CDK9-203ENST00000480353 ZHX1-C8orf76Q96EF9 292 aa13.71□□□□□ -0.21
CDK9-203ENST00000480353 TACO1Q9BSH4 297 aaKnown RBP13.71□□□□□ -0.21
CDK9-203ENST00000480353 INPP5KQ9BT40 448 aa13.71□□□□□ -0.21
CDK9-203ENST00000480353 SRXN1Q9BYN0 137 aa13.71□□□□□ -0.21
CDK9-203ENST00000480353 ARGLU1Q9NWB6 273 aaPredicted RBP13.71□□□□□ -0.21
CDK9-203ENST00000480353 ZIM2Q9NZV7 527 aa13.71□□□□□ -0.21
CDK9-203ENST00000480353 KLHL9Q9P2J3 617 aa13.71□□□□□ -0.21
CDK9-203ENST00000480353 AKAP9Q99996 3911 aa13.71□□□□□ -0.21
CDK9-203ENST00000480353 A0A1W2PNR3 127 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 HMGN4O00479 90 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 KLF11O14901 512 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 POLR3GO15318 223 aaPredicted RBP13.7□□□□□ -0.22
CDK9-203ENST00000480353 GUSBP08236 651 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 IL7RP16871 459 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 ENPP1P22413 925 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 IL12AP29459 219 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 AGTR1P30556 359 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 CRATP43155 626 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 SESN3P58005 492 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 RAC3P60763 192 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 CSNK2A1P68400 391 aaPredicted RBP13.7□□□□□ -0.22
CDK9-203ENST00000480353 KCNJ10P78508 379 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 CHRNEQ04844 493 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 GUSBP1Q15486 140 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 SLC25A53Q5H9E4 307 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 C6orf10Q5SRN2 563 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 ALKBH2Q6NS38 261 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 HMGN2P46Q86SG4 172 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 RNF128Q8TEB7 428 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 SLC25A43Q8WUT9 341 aaPredicted RBP13.7□□□□□ -0.22
CDK9-203ENST00000480353 WDR60Q8WVS4 1066 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 ITCHQ96J02 903 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 TRNT1Q96Q11 434 aaKnown RBP13.7□□□□□ -0.22
CDK9-203ENST00000480353 ALPK1Q96QP1 1244 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 QRSL1Q9H0R6 528 aaKnown RBP13.7□□□□□ -0.22
CDK9-203ENST00000480353 KLHL13Q9P2N7 655 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 P2RX2Q9UBL9 471 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 USH1CQ9Y6N9 552 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 AKAP6Q13023 2319 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 MED13LQ71F56 2210 aa13.7□□□□□ -0.22
CDK9-203ENST00000480353 IGHV3-15A0A0B4J1V0 119 aa13.69□□□□□ -0.22
CDK9-203ENST00000480353 CENPVL1A0A0U1RR11 272 aa13.69□□□□□ -0.22
CDK9-203ENST00000480353 SULT2B1O00204 365 aa13.69□□□□□ -0.22
CDK9-203ENST00000480353 CRYGSP22914 178 aa13.69□□□□□ -0.22
CDK9-203ENST00000480353 IL32P24001 234 aa13.69□□□□□ -0.22
CDK9-203ENST00000480353 PGM1P36871 562 aa13.69□□□□□ -0.22
CDK9-203ENST00000480353 APOBEC1P41238 236 aaKnown RBP13.69□□□□□ -0.22
CDK9-203ENST00000480353 CDKN2CP42773 168 aa13.69□□□□□ -0.22
CDK9-203ENST00000480353 POLR2JP52435 117 aaKnown RBP13.69□□□□□ -0.22
CDK9-203ENST00000480353 RASGEF1BQ0VAM2 473 aa13.69□□□□□ -0.22
CDK9-203ENST00000480353 MAPK14Q16539 360 aa13.69□□□□□ -0.22
CDK9-203ENST00000480353 SYPL1Q16563 259 aa13.69□□□□□ -0.22
CDK9-203ENST00000480353 PLEKHM3Q6ZWE6 761 aa13.69□□□□□ -0.22
CDK9-203ENST00000480353 TUSC5Q8IXB3 177 aa13.69□□□□□ -0.22
CDK9-203ENST00000480353 PEX5LQ8IYB4 626 aa13.69□□□□□ -0.22
CDK9-203ENST00000480353 SAP130Q9H0E3 1048 aa13.69□□□□□ -0.22
CDK9-203ENST00000480353 PLEKHF2Q9H8W4 249 aa13.69□□□□□ -0.22
CDK9-203ENST00000480353 UBTD1Q9HAC8 227 aa13.69□□□□□ -0.22
CDK9-203ENST00000480353 GP6Q9HCN6 339 aa13.69□□□□□ -0.22
CDK9-203ENST00000480353 ACER3Q9NUN7 267 aa13.69□□□□□ -0.22
CDK9-203ENST00000480353 CALML5Q9NZT1 146 aa13.69□□□□□ -0.22
CDK9-203ENST00000480353 KCNE5Q9UJ90 142 aa13.69□□□□□ -0.22
CDK9-203ENST00000480353 EFNA2O43921 213 aa13.68□□□□□ -0.22
CDK9-203ENST00000480353 ATE1O95260 518 aa13.68□□□□□ -0.22
CDK9-203ENST00000480353 YES1P07947 543 aa13.68□□□□□ -0.22
CDK9-203ENST00000480353 CD99P14209 185 aa13.68□□□□□ -0.22
CDK9-203ENST00000480353 FKBP2P26885 142 aaKnown RBP13.68□□□□□ -0.22
CDK9-203ENST00000480353 CCKARP32238 428 aa13.68□□□□□ -0.22
CDK9-203ENST00000480353 HTR3AP46098 478 aa13.68□□□□□ -0.22
CDK9-203ENST00000480353 DEFB113Q30KQ7 82 aa13.68□□□□□ -0.22
CDK9-203ENST00000480353 SYT14P1Q58G82 188 aa13.68□□□□□ -0.22
CDK9-203ENST00000480353 LRRC74BQ6ZQY2 392 aa13.68□□□□□ -0.22
CDK9-203ENST00000480353 GRINAQ7Z429 371 aa13.68□□□□□ -0.22
CDK9-203ENST00000480353 WFDC8Q8IUA0 241 aa13.68□□□□□ -0.22
CDK9-203ENST00000480353 CMIPQ8IY22 773 aa13.68□□□□□ -0.22
CDK9-203ENST00000480353 ANKFN1Q8N957 763 aa13.68□□□□□ -0.22
CDK9-203ENST00000480353 STEAP2Q8NFT2 490 aa13.68□□□□□ -0.22
CDK9-203ENST00000480353 MAELQ96JY0 434 aaKnown RBP13.68□□□□□ -0.22
CDK9-203ENST00000480353 ATP6V1G3Q96LB4 118 aa13.68□□□□□ -0.22
CDK9-203ENST00000480353 ACTR6Q9GZN1 396 aa13.68□□□□□ -0.22
CDK9-203ENST00000480353 COQ10BQ9H8M1 238 aa13.68□□□□□ -0.22
CDK9-203ENST00000480353 MTHFD2LQ9H903 347 aaPredicted RBP13.68□□□□□ -0.22
CDK9-203ENST00000480353 EXOSC3Q9NQT5 275 aaKnown RBP13.68□□□□□ -0.22
CDK9-203ENST00000480353 GPR52Q9Y2T5 361 aa13.68□□□□□ -0.22
CDK9-203ENST00000480353 F8P00451 2351 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 NTN1O95631 604 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 DBIP07108 87 aaKnown RBP13.67□□□□□ -0.22
CDK9-203ENST00000480353 CCNA2P20248 432 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 FPR1P21462 350 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 MAGEA8P43361 318 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 IDH2P48735 452 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms