RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 GHDCQ8N2G8 530 aa17.74■□□□□ 0.43
TNFRSF8-204ENST00000479933 MSANTD3Q96H12 275 aa17.74■□□□□ 0.43
TNFRSF8-204ENST00000479933 SAMD8Q96LT4 415 aa17.74■□□□□ 0.43
TNFRSF8-204ENST00000479933 UBQLN3Q9H347 655 aa17.74■□□□□ 0.43
TNFRSF8-204ENST00000479933 ZNF304Q9HCX3 659 aa17.74■□□□□ 0.43
TNFRSF8-204ENST00000479933 EVA1BQ9NVM1 165 aa17.74■□□□□ 0.43
TNFRSF8-204ENST00000479933 RBFOX1Q9NWB1 397 aaKnown RBP17.74■□□□□ 0.43
TNFRSF8-204ENST00000479933 ZNF223Q9UK11 482 aaPredicted RBP17.74■□□□□ 0.43
TNFRSF8-204ENST00000479933 CBLCQ9ULV8 474 aa17.74■□□□□ 0.43
TNFRSF8-204ENST00000479933 FAM157BP0CG42 384 aa17.73■□□□□ 0.43
TNFRSF8-204ENST00000479933 GABRG2P18507 467 aa17.73■□□□□ 0.43
TNFRSF8-204ENST00000479933 ATP6V1E1P36543 226 aa17.73■□□□□ 0.43
TNFRSF8-204ENST00000479933 MAP3K8P41279 467 aa17.73■□□□□ 0.43
TNFRSF8-204ENST00000479933 SHC2P98077 582 aa17.73■□□□□ 0.43
TNFRSF8-204ENST00000479933 MRPL28Q13084 256 aaKnown RBP17.73■□□□□ 0.43
TNFRSF8-204ENST00000479933 OR1Q1Q15612 314 aa17.73■□□□□ 0.43
TNFRSF8-204ENST00000479933 MAPK14Q16539 360 aa17.73■□□□□ 0.43
TNFRSF8-204ENST00000479933 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.73■□□□□ 0.43
TNFRSF8-204ENST00000479933 COL28A1Q2UY09 1125 aa17.73■□□□□ 0.43
TNFRSF8-204ENST00000479933 PDZK1Q5T2W1 519 aa17.73■□□□□ 0.43
TNFRSF8-204ENST00000479933 DDI2Q5TDH0 399 aa17.73■□□□□ 0.43
TNFRSF8-204ENST00000479933 FAM131AQ6UXB0 335 aa17.73■□□□□ 0.43
TNFRSF8-204ENST00000479933 CXXC5Q7LFL8 322 aaKnown RBP17.73■□□□□ 0.43
TNFRSF8-204ENST00000479933 OR13H1Q8NG92 308 aa17.73■□□□□ 0.43
TNFRSF8-204ENST00000479933 TMEM239Q8WW34 195 aa17.73■□□□□ 0.43
TNFRSF8-204ENST00000479933 HS6ST2Q96MM7 605 aa17.73■□□□□ 0.43
TNFRSF8-204ENST00000479933 CD180Q99467 661 aa17.73■□□□□ 0.43
TNFRSF8-204ENST00000479933 TMEM74BQ9NUR3 256 aa17.73■□□□□ 0.43
TNFRSF8-204ENST00000479933 PLEKHB1Q9UF11 243 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF8-204ENST00000479933 MMP17Q9ULZ9 603 aa17.73■□□□□ 0.43
TNFRSF8-204ENST00000479933 ARHGEF17Q96PE2 2063 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF8-204ENST00000479933 RCBTB2O95199 551 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 HLA-DPB1P04440 258 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 PVRP15151 417 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 SDC2P34741 201 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 LSSP48449 732 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 CCR5P51681 352 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 RAB38P57729 211 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 ZNF267Q14586 743 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 MZT2BQ6NZ67 158 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 LHFPL3Q86UP9 236 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 COMMD7Q86VX2 200 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 LINC00518Q8N0U6 118 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 FANK1Q8TC84 345 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 CCDC3Q9BQI4 270 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 ZNF559Q9BR84 538 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 MARVELD1Q9BSK0 173 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 SIDT1Q9NXL6 827 aaKnown RBP17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 CENPVL1A0A0U1RR11 272 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 RPS10-NUDT3A0A1W2PQS6 291 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 C10orf142B7Z368 130 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 CDC42EP2O14613 210 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 GUSBP08236 651 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 BMP7P18075 431 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 GALP22466 123 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 HTR2AP28223 471 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 MGAT2Q10469 447 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 STK11Q15831 433 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 GPR139Q6DWJ6 353 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 ZNF613Q6PF04 617 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 SHFQ7M4L6 423 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 OR4F15Q8NGB8 312 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 CTHRC1Q96CG8 243 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 OR52D1Q9H346 318 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 ZC4H2Q9NQZ6 224 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 ASB6Q9NWX5 421 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 FKBP7Q9Y680 259 aa17.72■□□□□ 0.43
TNFRSF8-204ENST00000479933 BRINP1O60477 761 aa17.71■□□□□ 0.43
TNFRSF8-204ENST00000479933 PPM1BO75688 479 aa17.71■□□□□ 0.43
TNFRSF8-204ENST00000479933 RAF1P04049 648 aa17.71■□□□□ 0.43
TNFRSF8-204ENST00000479933 SLC35E2P0CK97 266 aa17.71■□□□□ 0.43
TNFRSF8-204ENST00000479933 BMP8BP34820 402 aa17.71■□□□□ 0.43
TNFRSF8-204ENST00000479933 GBX2P52951 348 aaPredicted RBP17.71■□□□□ 0.43
TNFRSF8-204ENST00000479933 DAB2P98082 770 aa17.71■□□□□ 0.43
TNFRSF8-204ENST00000479933 BDH1Q02338 343 aa17.71■□□□□ 0.43
TNFRSF8-204ENST00000479933 GRK1Q15835 563 aa17.71■□□□□ 0.43
TNFRSF8-204ENST00000479933 ARMC6Q6NXE6 501 aa17.71■□□□□ 0.43
TNFRSF8-204ENST00000479933 PRSS41Q7RTY9 318 aa17.71■□□□□ 0.43
TNFRSF8-204ENST00000479933 BMP8AQ7Z5Y6 402 aa17.71■□□□□ 0.43
TNFRSF8-204ENST00000479933 CPOQ8IVL8 374 aa17.71■□□□□ 0.43
TNFRSF8-204ENST00000479933 TMEFF1Q8IYR6 380 aa17.71■□□□□ 0.43
TNFRSF8-204ENST00000479933 TMEM52Q8NDY8 209 aa17.71■□□□□ 0.43
TNFRSF8-204ENST00000479933 PATE1Q8WXA2 126 aa17.71■□□□□ 0.43
TNFRSF8-204ENST00000479933 HINT3Q9NQE9 182 aaKnown RBP17.71■□□□□ 0.43
TNFRSF8-204ENST00000479933 MCUBQ9NWR8 336 aa17.71■□□□□ 0.43
TNFRSF8-204ENST00000479933 USP36Q9P275 1121 aaKnown RBP17.71■□□□□ 0.43
TNFRSF8-204ENST00000479933 LINC00854A0A1B0GVQ3 168 aa17.71■□□□□ 0.42
TNFRSF8-204ENST00000479933 ORC5O43913 435 aa17.71■□□□□ 0.42
TNFRSF8-204ENST00000479933 NKX2-2O95096 273 aa17.71■□□□□ 0.42
TNFRSF8-204ENST00000479933 LYPD3O95274 346 aa17.71■□□□□ 0.42
TNFRSF8-204ENST00000479933 CSF2P04141 144 aa17.71■□□□□ 0.42
TNFRSF8-204ENST00000479933 RRASP10301 218 aa17.71■□□□□ 0.42
TNFRSF8-204ENST00000479933 PRG2P13727 222 aa17.71■□□□□ 0.42
TNFRSF8-204ENST00000479933 GABRA3P34903 492 aa17.71■□□□□ 0.42
TNFRSF8-204ENST00000479933 VSX2P58304 361 aaPredicted RBP17.71■□□□□ 0.42
TNFRSF8-204ENST00000479933 FABP5Q01469 135 aa17.71■□□□□ 0.42
TNFRSF8-204ENST00000479933 TMPRSS11FQ6ZWK6 438 aa17.71■□□□□ 0.42
TNFRSF8-204ENST00000479933 LNX2Q8N448 690 aa17.71■□□□□ 0.42
TNFRSF8-204ENST00000479933 SLC37A2Q8TED4 501 aa17.71■□□□□ 0.42
TNFRSF8-204ENST00000479933 AKAP1Q92667 903 aaKnown RBP eCLIP17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms