RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 MYOTQ9UBF9 498 aa6.09□□□□□ -1.43
USP48-208ENST00000479177 DNAJB9Q9UBS3 223 aa6.09□□□□□ -1.43
USP48-208ENST00000479177 SLC9A8Q9Y2E8 581 aa6.09□□□□□ -1.43
USP48-208ENST00000479177 SH3GLB1Q9Y371 365 aa6.09□□□□□ -1.43
USP48-208ENST00000479177 DTNAQ9Y4J8 743 aa6.09□□□□□ -1.43
USP48-208ENST00000479177 NPFFR2Q9Y5X5 522 aa6.09□□□□□ -1.43
USP48-208ENST00000479177 ENPP4Q9Y6X5 453 aa6.09□□□□□ -1.43
USP48-208ENST00000479177 URB1O60287 2271 aaKnown RBP6.09□□□□□ -1.44
USP48-208ENST00000479177 PRRC2CQ9Y520 2896 aaKnown RBP6.08□□□□□ -1.44
USP48-208ENST00000479177 SERINC4A6NH21 518 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 ALG1L2C9J202 215 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 ADAM10O14672 748 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 FRS3O43559 492 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 TLX3O43711 291 aaPredicted RBP6.08□□□□□ -1.44
USP48-208ENST00000479177 HS6ST1O60243 411 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 FADS1O60427 444 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 DPM1O60762 260 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 UGT2B11O75310 529 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 SEMA7AO75326 666 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 DNAJB5O75953 348 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 DIRAS1O95057 198 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 CST1P01037 141 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 ICAM2P13598 275 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 IL7RP16871 459 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 NAGAP17050 411 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 ITGA2P17301 1181 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 TBXA2RP21731 343 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 EVI2BP34910 448 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 GCKP35557 465 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 SOX3P41225 446 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 TMED10P49755 219 aaKnown RBP6.08□□□□□ -1.44
USP48-208ENST00000479177 ZNF136P52737 540 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 PNLIPRP2P54317 469 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 RGS8P57771 180 aaPredicted RBP6.08□□□□□ -1.44
USP48-208ENST00000479177 FBXW4P57775 412 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 MLF1P58340 268 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 CDC20Q12834 499 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 AIMP2Q13155 320 aaKnown RBP6.08□□□□□ -1.44
USP48-208ENST00000479177 SKP2Q13309 424 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 EFR3AQ14156 821 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 CD226Q15762 336 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 ZSWIM7Q19AV6 140 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 PLEKHN1Q494U1 663 aaPredicted RBP6.08□□□□□ -1.44
USP48-208ENST00000479177 KLHL26Q53HC5 615 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 DCAF10Q5QP82 559 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 OGFRL1Q5TC84 451 aaPredicted RBP6.08□□□□□ -1.44
USP48-208ENST00000479177 FCRLBQ6BAA4 426 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 OR2T5Q6IEZ7 315 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 H3F3CQ6NXT2 135 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 JMJD6Q6NYC1 403 aaPredicted RBP6.08□□□□□ -1.44
USP48-208ENST00000479177 APOOLQ6UXV4 268 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 DEF8Q6ZN54 512 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 RBM45Q8IUH3 476 aaKnown RBP6.08□□□□□ -1.44
USP48-208ENST00000479177 EPHX4Q8IUS5 362 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 GRAMD2AQ8IUY3 354 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 KBTBD2Q8IY47 623 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 SLC5A8Q8N695 610 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 ZNF614Q8N883 585 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 ZNF527Q8NB42 609 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 POGLUT1Q8NBL1 392 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 OR6T1Q8NGN1 323 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 OR2T29Q8NH02 315 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 BRIX1Q8TDN6 353 aaKnown RBP6.08□□□□□ -1.44
USP48-208ENST00000479177 PHF10Q8WUB8 498 aaKnown RBP6.08□□□□□ -1.44
USP48-208ENST00000479177 PSMF1Q92530 271 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 CNOT9Q92600 299 aaKnown RBP6.08□□□□□ -1.44
USP48-208ENST00000479177 SPACA9Q96E40 222 aaPredicted RBP6.08□□□□□ -1.44
USP48-208ENST00000479177 CENPNQ96H22 339 aaPredicted RBP6.08□□□□□ -1.44
USP48-208ENST00000479177 ZNF300Q96RE9 604 aaPredicted RBP6.08□□□□□ -1.44
USP48-208ENST00000479177 PIP5K1AQ99755 562 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 AMBRA1Q9C0C7 1298 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 SEMA6AQ9H2E6 1030 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 ARMC7Q9H6L4 198 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 EVA1AQ9H8M9 152 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 NTN4Q9HB63 628 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.08□□□□□ -1.44
USP48-208ENST00000479177 RLIMQ9NVW2 624 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 KLHL28Q9NXS3 571 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 FBXL7Q9UJT9 491 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 SLC13A4Q9UKG4 626 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 ACAD8Q9UKU7 415 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 SLC35A3Q9Y2D2 325 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 MSRB2Q9Y3D2 182 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 PKD1L2Q7Z442 2459 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 DMXL2Q8TDJ6 3036 aa6.08□□□□□ -1.44
USP48-208ENST00000479177 PIEZO2Q9H5I5 2752 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 DSPP15924 2871 aaKnown RBP6.07□□□□□ -1.44
USP48-208ENST00000479177 A0A1W2PQD3 144 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 ZC3H12DA2A288 527 aaKnown RBP6.07□□□□□ -1.44
USP48-208ENST00000479177 SAC3D1A6NKF1 404 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 ZNF891A8MT65 544 aaPredicted RBP6.07□□□□□ -1.44
USP48-208ENST00000479177 J3KTA2 159 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 SCDO00767 359 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 FFAR1O14842 300 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 ADAMDEC1O15204 470 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 TPST2O60704 377 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 FMO6PO60774 539 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 ITGA10O75578 1167 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 OR6B1O95007 311 aa6.07□□□□□ -1.44
USP48-208ENST00000479177 CSTAP01040 98 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms