RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 SLC25A43Q8WUT9 341 aaPredicted RBP13.92□□□□□ -0.18
C9orf3-217ENST00000479161 LRRC58Q96CX6 371 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 SPOCK3Q9BQ16 436 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 KLHDC3Q9BQ90 382 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 SFXN3Q9BWM7 321 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 QRSL1Q9H0R6 528 aaKnown RBP13.92□□□□□ -0.18
C9orf3-217ENST00000479161 CACYBPQ9HB71 228 aaKnown RBP13.92□□□□□ -0.18
C9orf3-217ENST00000479161 SLC24A3Q9HC58 644 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 SERINC1Q9NRX5 453 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 GID8Q9NWU2 228 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 FAM53CQ9NYF3 392 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 FOXD3Q9UJU5 478 aaPredicted RBP13.92□□□□□ -0.18
C9orf3-217ENST00000479161 AP3M1Q9Y2T2 418 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 SLC22A20A6NK97 555 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 C5orf58C9J3I9 102 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 EFNA2O43921 213 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 PABPC4LP0CB38 370 aaKnown RBP13.91□□□□□ -0.18
C9orf3-217ENST00000479161 PRKAR1BP31321 381 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 ZNF136P52737 540 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 SEC24CP53992 1094 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 PCBP3P57721 371 aaKnown RBP13.91□□□□□ -0.18
C9orf3-217ENST00000479161 FOXF1Q12946 379 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 CDSNQ15517 529 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 NDUFAF6Q330K2 333 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 MMEL1Q495T6 779 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 NANOGP8Q6NSW7 305 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 C3orf33Q6P1S2 294 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 ZNF550Q7Z398 422 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 PIGWQ7Z7B1 504 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 CPLX4Q7Z7G2 160 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 CCDC71Q8IV32 467 aaPredicted RBP13.91□□□□□ -0.18
C9orf3-217ENST00000479161 C10orf111Q8N326 155 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 TMCO5AQ8N6Q1 288 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 C11orf65Q8NCR3 313 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 HIPK4Q8NE63 616 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 OR5M1Q8NGP8 315 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 CNOT9Q92600 299 aaKnown RBP13.91□□□□□ -0.18
C9orf3-217ENST00000479161 KLHL15Q96M94 604 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 NPAS1Q99742 590 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 ELAC2Q9BQ52 826 aaKnown RBP13.91□□□□□ -0.18
C9orf3-217ENST00000479161 CCDC106Q9BWC9 280 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 ENKD1Q9H0I2 346 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 MYLK2Q9H1R3 596 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 NANOGQ9H9S0 305 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 RNF122Q9H9V4 155 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 GP6Q9HCN6 339 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 TIGARQ9NQ88 270 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 GLRX2Q9NS18 164 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 JKAMPQ9P055 326 aa13.91□□□□□ -0.18
C9orf3-217ENST00000479161 ZNF443Q9Y2A4 671 aaPredicted RBP13.91□□□□□ -0.18
C9orf3-217ENST00000479161 ANKHD1Q8IWZ3 2542 aaKnown RBP13.91□□□□□ -0.18
C9orf3-217ENST00000479161 CELSR2Q9HCU4 2923 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 A1L4Q6 167 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 PRORSD1PA6NEY8 169 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 CFAP73A6NFT4 308 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 PRSS44E7EML9 344 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 FXYD1O00168 92 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 SYT5O00445 386 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 MRASO14807 208 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 GMFGO60234 142 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 SERPINB7O75635 380 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 IGFBP2P18065 325 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 SLC1A3P43003 542 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 EPS8Q12929 822 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 SCARB2Q14108 478 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 SP5Q6BEB4 398 aaPredicted RBP13.9□□□□□ -0.18
C9orf3-217ENST00000479161 DHRS4L2Q6PKH6 230 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 PLEKHM3Q6ZWE6 761 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 PTOV1Q86YD1 416 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 UBQLNLQ8IYU4 475 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 C9orf106Q8NAJ2 232 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 NAXEQ8NCW5 288 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 OR2V1Q8NHB1 315 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 MAL2Q969L2 176 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 CPNE4Q96A23 557 aaPredicted RBP13.9□□□□□ -0.18
C9orf3-217ENST00000479161 ZNF524Q96C55 264 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 LRRC46Q96FV0 321 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 ZNF607Q96SK3 696 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 ADAM19Q9H013 955 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 PIGMQ9H3S5 423 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 CHST2Q9Y4C5 530 aa13.9□□□□□ -0.18
C9orf3-217ENST00000479161 SPIN1Q9Y657 262 aaPredicted RBP13.9□□□□□ -0.18
C9orf3-217ENST00000479161 A0A0J9YW62 118 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 CLDN24A6NM45 220 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 KDM4EB2RXH2 506 aaPredicted RBP13.89□□□□□ -0.19
C9orf3-217ENST00000479161 SHISA8B8ZZ34 492 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 ZNF208O43345 1280 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 DNPH1O43598 174 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 ADAM11O75078 769 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 BCAS1O75363 584 aaPredicted RBP13.89□□□□□ -0.19
C9orf3-217ENST00000479161 CYP7B1O75881 506 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 TGM6O95932 706 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 TMIGD3P0DMS9 266 aaPredicted RBP13.89□□□□□ -0.19
C9orf3-217ENST00000479161 IL11P20809 199 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 TCEA1P23193 301 aaKnown RBP13.89□□□□□ -0.19
C9orf3-217ENST00000479161 PRDX6P30041 224 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 ACAA2P42765 397 aaKnown RBP13.89□□□□□ -0.19
C9orf3-217ENST00000479161 GZMMP51124 257 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 CCR4P51679 360 aa13.89□□□□□ -0.19
C9orf3-217ENST00000479161 CARD18P57730 90 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms