RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 RERGQ96A58 199 aaPredicted RBP9.99□□□□□ -0.81
VPS52-217ENST00000478934 ANKRD9Q96BM1 317 aaPredicted RBP9.99□□□□□ -0.81
VPS52-217ENST00000478934 GDF15Q99988 308 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 DZANK1Q9NVP4 752 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 CPNE7Q9UBL6 633 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 ZMIZ1Q9ULJ6 1067 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 DAPL1A0PJW8 107 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 J3QLW9 94 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 NDUFB5O43674 189 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 TSC22D2O75157 780 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 CBX7O95931 251 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 ZNF19P17023 458 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 BMP7P18075 431 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 PAICSP22234 425 aaKnown RBP9.99□□□□□ -0.81
VPS52-217ENST00000478934 HNRNPA2B1P22626 353 aaKnown RBP9.99□□□□□ -0.81
VPS52-217ENST00000478934 RPS5P46782 204 aaKnown RBP9.99□□□□□ -0.81
VPS52-217ENST00000478934 NDUFA5Q16718 116 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 PRPF38BQ5VTL8 546 aaKnown RBP9.99□□□□□ -0.81
VPS52-217ENST00000478934 THOC7Q6I9Y2 204 aaKnown RBP9.99□□□□□ -0.81
VPS52-217ENST00000478934 ABHD13Q7L211 337 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 GJD3Q8N144 294 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 ACBD7Q8N6N7 88 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 CSNK1A1LQ8N752 337 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 SAMD12Q8N8I0 201 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 CAMKVQ8NCB2 501 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 ZNRF4Q8WWF5 429 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 SLC22A18Q96BI1 424 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 ORAI1Q96D31 301 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 TEAD3Q99594 435 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 FN3KQ9H479 309 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 CACYBPQ9HB71 228 aaKnown RBP9.99□□□□□ -0.81
VPS52-217ENST00000478934 RPRD1BQ9NQG5 326 aaKnown RBP9.99□□□□□ -0.81
VPS52-217ENST00000478934 RBFOX1Q9NWB1 397 aaKnown RBP9.99□□□□□ -0.81
VPS52-217ENST00000478934 BABAM2Q9NXR7 383 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 HCN3Q9P1Z3 774 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 PCOLCE2Q9UKZ9 415 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 SIGLEC7Q9Y286 467 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 NCKAP1Q9Y2A7 1128 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 MAU2Q9Y6X3 613 aa9.99□□□□□ -0.81
VPS52-217ENST00000478934 HEATR5AQ86XA9 2040 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 TRAV6A0A075B6T7 132 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 TCRBV21S2A2A0A5A6 115 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 IRGMA1A4Y4 181 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 C4orf47A7E2U8 309 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 DBIP07108 87 aaKnown RBP9.98□□□□□ -0.81
VPS52-217ENST00000478934 SYPP08247 313 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 ST6GAL1P15907 406 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 GALK2Q01415 458 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 SLC25A35Q3KQZ1 300 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 KRT74Q7RTS7 529 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 OR4M1Q8NGD0 313 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 OR5J2Q8NH18 312 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 BAHD1Q8TBE0 780 aaPredicted RBP9.98□□□□□ -0.81
VPS52-217ENST00000478934 BRIX1Q8TDN6 353 aaKnown RBP9.98□□□□□ -0.81
VPS52-217ENST00000478934 SOSTQ9BQB4 213 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 TMEM43Q9BTV4 400 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 ISYNA1Q9NPH2 558 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 PIAS3Q9Y6X2 628 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 A0A0A6YYC8 382 aaPredicted RBP9.98□□□□□ -0.81
VPS52-217ENST00000478934 A0A1B0GWA3 101 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 I3L1I5 382 aaPredicted RBP9.98□□□□□ -0.81
VPS52-217ENST00000478934 GALR3O60755 368 aaPredicted RBP9.98□□□□□ -0.81
VPS52-217ENST00000478934 ATP1B1P05026 303 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 HMGN1P05114 100 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 YES1P07947 543 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 RPS4Y1P22090 263 aaKnown RBP9.98□□□□□ -0.81
VPS52-217ENST00000478934 GPLD1P80108 840 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 LYPD4Q6UWN0 246 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 AVL9Q8NBF6 648 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 OR52L1Q8NGH7 329 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 OR52N1Q8NH53 320 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 OR5W2Q8NH69 310 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 SPACA7Q96KW9 195 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 C4orf36Q96KX1 117 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 CITED4Q96RK1 184 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 TEX12Q9BXU0 123 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 S1PR5Q9H228 398 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 C2orf42Q9NWW7 574 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 RASD1Q9Y272 281 aa9.98□□□□□ -0.81
VPS52-217ENST00000478934 MRPS7Q9Y2R9 242 aaKnown RBP9.98□□□□□ -0.81
VPS52-217ENST00000478934 A0A1W2PRG6 482 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 EEF1E1O43324 174 aaKnown RBP9.97□□□□□ -0.81
VPS52-217ENST00000478934 SCO2O43819 266 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 BRINP1O60477 761 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 APBB3O95704 486 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 THBS1P07996 1170 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 FAM157BP0CG42 384 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 PRKAR1AP10644 381 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 PRKCAP17252 672 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 POU6F2P78424 691 aaPredicted RBP9.97□□□□□ -0.81
VPS52-217ENST00000478934 BTG2P78543 158 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 PSG6Q00889 435 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 FHL1Q13642 323 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 AMZ1Q400G9 498 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 LNX2Q8N448 690 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 DEFB119Q8N690 84 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 CDRT4Q8N9R6 151 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 ZMYND19Q96E35 227 aaPredicted RBP9.97□□□□□ -0.81
VPS52-217ENST00000478934 DNAJA3Q96EY1 480 aa9.97□□□□□ -0.81
VPS52-217ENST00000478934 LMF1Q96S06 567 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms