RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 PRSS21Q9Y6M0 314 aa4.01□□□□□ -1.77
UPF3B-203ENST00000478840 TRAV9-2A0A087WT02 112 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 A0A1B0GVL5 298 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 EFCAB7A8K855 629 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 E9PQ18 207 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 CDX4O14627 284 aaPredicted RBP4□□□□□ -1.77
UPF3B-203ENST00000478840 PRKYO43930 277 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 KLHL41O60662 606 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 ZNF253O75346 499 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 UPK3AO75631 287 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 AP2A1O95782 977 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 BCL3P20749 454 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 YWHABP31946 246 aaKnown RBP4□□□□□ -1.77
UPF3B-203ENST00000478840 NF2P35240 595 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 HMGCLP35914 325 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 RPL34P49207 117 aaKnown RBP4□□□□□ -1.77
UPF3B-203ENST00000478840 STARP49675 285 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 PRKXP51817 358 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 SLC10A1Q14973 349 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 FCN2Q15485 313 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 METTL11BQ5VVY1 283 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 LIPNQ5VXI9 398 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 ECHDC2Q86YB7 292 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 HIPK1Q86Z02 1210 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 SLC35F2Q8IXU6 374 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 OR2L13Q8N349 312 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 SVOPLQ8N434 492 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 ALLCQ8N6M5 410 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 OR1L4Q8NGR5 311 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 UBE2E3Q969T4 207 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 FAF2Q96CS3 445 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 CYP2S1Q96SQ9 504 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 RAB34Q9BZG1 259 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 TRIM15Q9C019 465 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 POLE4Q9NR33 117 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 TMED5Q9Y3A6 229 aa4□□□□□ -1.77
UPF3B-203ENST00000478840 PCNX3Q9H6A9 2034 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 A8MX80 341 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 FCN1O00602 326 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 LYPD3O95274 346 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 CRYGBP07316 175 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 COX5AP20674 150 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 PTBP1P26599 531 aaKnown RBP eCLIP3.99□□□□□ -1.77
UPF3B-203ENST00000478840 GCAP28676 217 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 XCR1P46094 333 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 DAP3P51398 398 aaKnown RBP3.99□□□□□ -1.77
UPF3B-203ENST00000478840 ATP1B3P54709 279 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 MRPS11P82912 194 aaKnown RBP3.99□□□□□ -1.77
UPF3B-203ENST00000478840 MS4A2Q01362 244 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 OGDHQ02218 1023 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 PAX2Q02962 417 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 MRPL28Q13084 256 aaKnown RBP3.99□□□□□ -1.77
UPF3B-203ENST00000478840 SRSF5Q13243 272 aaKnown RBP3.99□□□□□ -1.77
UPF3B-203ENST00000478840 PLD1Q13393 1074 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 IMMTQ16891 758 aaKnown RBP3.99□□□□□ -1.77
UPF3B-203ENST00000478840 MRGPRG-AS1Q2M3A8 158 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 OTUD3Q5T2D3 398 aaPredicted RBP3.99□□□□□ -1.77
UPF3B-203ENST00000478840 ARMC12Q5T9G4 340 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 Q6ZTC4 211 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 PAQR7Q86WK9 346 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 KRTAP7-1Q8IUC3 87 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 TTC5Q8N0Z6 440 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 MAGEE2Q8TD90 523 aaPredicted RBP3.99□□□□□ -1.77
UPF3B-203ENST00000478840 MAIP1Q8WWC4 291 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 RASL10AQ92737 203 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 TOMM40LQ969M1 308 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 IL4I1Q96RQ9 567 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 VGLL1Q99990 258 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 ANP32EQ9BTT0 268 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 TSSK1BQ9BXA7 367 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 POPDC2Q9HBU9 364 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 PAK1IP1Q9NWT1 392 aaPredicted RBP3.99□□□□□ -1.77
UPF3B-203ENST00000478840 RAB20Q9NX57 234 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 DPM3Q9P2X0 92 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 PHF11Q9UIL8 331 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 FRMPD3Q5JV73 1810 aa3.99□□□□□ -1.77
UPF3B-203ENST00000478840 PPIAL4EA0A075B759 164 aa3.98□□□□□ -1.77
UPF3B-203ENST00000478840 A0A1B0GWB2 263 aa3.98□□□□□ -1.77
UPF3B-203ENST00000478840 CCT8L1PA6NM43 557 aa3.98□□□□□ -1.77
UPF3B-203ENST00000478840 ZNF705EA8MWA4 302 aaPredicted RBP3.98□□□□□ -1.77
UPF3B-203ENST00000478840 E7ESA3 106 aa3.98□□□□□ -1.77
UPF3B-203ENST00000478840 SULT2B1O00204 365 aa3.98□□□□□ -1.77
UPF3B-203ENST00000478840 POLR2DO15514 142 aaKnown RBP3.98□□□□□ -1.77
UPF3B-203ENST00000478840 PI15O43692 258 aa3.98□□□□□ -1.77
UPF3B-203ENST00000478840 GPX5O75715 221 aa3.98□□□□□ -1.77
UPF3B-203ENST00000478840 NOL4O94818 638 aa3.98□□□□□ -1.77
UPF3B-203ENST00000478840 DIRAS1O95057 198 aa3.98□□□□□ -1.77
UPF3B-203ENST00000478840 AGTP01019 485 aa3.98□□□□□ -1.77
UPF3B-203ENST00000478840 PPIAL4FP0DN26 164 aa3.98□□□□□ -1.77
UPF3B-203ENST00000478840 ETS2P15036 469 aa3.98□□□□□ -1.77
UPF3B-203ENST00000478840 POLR2EP19388 210 aaKnown RBP3.98□□□□□ -1.77
UPF3B-203ENST00000478840 FGF9P31371 208 aaPredicted RBP3.98□□□□□ -1.77
UPF3B-203ENST00000478840 CCR1P32246 355 aa3.98□□□□□ -1.77
UPF3B-203ENST00000478840 QARSP47897 775 aaKnown RBP3.98□□□□□ -1.77
UPF3B-203ENST00000478840 RPS14P62263 151 aaKnown RBP3.98□□□□□ -1.77
UPF3B-203ENST00000478840 RPL32P62910 135 aaKnown RBP3.98□□□□□ -1.77
UPF3B-203ENST00000478840 CUL1Q13616 776 aa3.98□□□□□ -1.77
UPF3B-203ENST00000478840 KLHL38Q2WGJ6 581 aa3.98□□□□□ -1.77
UPF3B-203ENST00000478840 C14orf177Q52M58 125 aa3.98□□□□□ -1.77
UPF3B-203ENST00000478840 CEP85LQ5SZL2 805 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms